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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2987 and PfGW456L13_2988 are separated by 101 nucleotides
PfGW456L13_2988 and PfGW456L13_2989 are separated by 21 nucleotides
PfGW456L13_2989 and PfGW456L13_2990 are separated by 152 nucleotides
PfGW456L13_2990 and PfGW456L13_2991 are separated by 81 nucleotides
PfGW456L13_2987 - Transcriptional regulator, at 3,331,611 to 3,332,504
_2987
PfGW456L13_2988 - Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2), at 3,332,606 to 3,333,697
_2988
PfGW456L13_2989 - Agmatinase (EC 3.5.3.11), at 3,333,719 to 3,334,678
_2989
PfGW456L13_2990 - Dihydrofolate reductase (EC 1.5.1.3), at 3,334,831 to 3,335,370
_2990
PfGW456L13_2991 - hypothetical protein, at 3,335,452 to 3,335,721
_2991
Group
Condition
PfGW456L13
_2987
PfGW456L13
_2988
PfGW456L13
_2989
PfGW456L13
_2990
PfGW456L13
_2991
carbon source
D-Galactose (C)
-0.6
-0.0
-0.3
-0.6
-0.6
carbon source
L-Glutamine (C)
-0.6
+0.3
+0.3
-1.0
-0.9
nitrogen source
L-Aspartic Acid (N)
-1.1
-0.1
-0.1
-0.0
+0.0
nitrogen source
L-Glutamic (N)
-1.0
-0.0
-0.1
-0.2
+0.1
stress
Benzethonium chloride 0.0125 mM
-0.7
-0.0
-0.2
-0.2
+0.1
carbon source
D-Glucose (C)
-0.9
+0.0
+0.3
-0.3
-0.1
carbon source
L-Valine (C)
-0.6
+0.1
+0.2
-0.2
-0.3
carbon source
L-Phenylalanine (C)
-1.0
+0.1
+0.1
-0.1
+0.1
carbon source
L-Malic (C)
-0.9
+0.1
-0.2
+0.3
+0.0
carbon source
a-Ketoglutaric (C)
+0.4
+0.2
-0.1
-0.6
-0.4
nitrogen source
L-Proline (N)
-0.6
+0.0
-0.2
-0.0
+0.3
carbon source
a-Ketoglutaric (C)
+0.1
-0.1
-0.1
-0.6
+0.4
nitrogen source
L-Serine (N)
-0.4
-0.2
-0.2
+0.0
+0.4
nitrogen source
Ammonium chloride (N)
-0.5
-0.3
+0.2
+0.0
+0.3
stress
Aluminum chloride 5 mM
-0.4
-0.1
+0.1
+0.2
+0.4
carbon source
D-Lactate (C)
+0.3
+0.4
-0.3
-0.1
-0.2
carbon source
L-Lactate (C)
-0.2
+0.3
+0.2
-0.3
+0.2
carbon source
D-Gluconic Acid (C)
+0.8
+0.3
+0.3
-0.4
-0.7
nitrogen source
L-Threonine (N)
+0.5
-0.1
-0.3
+0.2
+0.0
carbon source
octanoate (C)
+0.2
+0.4
+0.5
-0.5
-0.4
carbon source
D-Fructose (C)
+0.6
+0.3
-0.4
-0.0
-0.2
carbon source
L-Arabinose (C)
-0.6
+0.1
+0.3
+0.5
+0.2
carbon source
succinate (C)
-0.4
+0.3
-0.0
+0.5
+0.3
nitrogen source
L-Leucine (N)
+0.7
-0.0
-0.3
+0.1
+0.2
nitrogen source
L-Phenylalanine (N)
+0.6
+0.2
-0.1
+0.1
+0.2
stress
Lomefloxacin 0.0004 mM
+0.9
+0.3
-0.0
-0.4
+0.2
stress
A22 0.04 mg/ml
+1.0
+0.3
+0.0
-0.2
+0.1
carbon source
D-Glucosamine Hydrochloride (C)
-0.1
+0.1
+0.4
+0.4
+0.4
stress
Zinc 1 mM
+0.6
+0.1
+0.1
+0.4
+0.1
carbon source
Trisodium citrate (C)
+0.9
+0.2
+0.2
-0.0
+0.2
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