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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2954 and PfGW456L13_2955 are separated by 14 nucleotides
PfGW456L13_2955 and PfGW456L13_2956 are separated by 293 nucleotides
PfGW456L13_2956 and PfGW456L13_2957 are separated by 4 nucleotides
PfGW456L13_2957 and PfGW456L13_2958 are separated by 47 nucleotides
PfGW456L13_2954 - RND efflux system, inner membrane transporter CmeB, at 3,295,082 to 3,298,180
_2954
PfGW456L13_2955 - RND efflux system, membrane fusion protein CmeA, at 3,298,195 to 3,299,352
_2955
PfGW456L13_2956 - Transcriptional regulatory protein RstA, at 3,299,646 to 3,300,347
_2956
PfGW456L13_2957 - Sensory histidine kinase QseC, at 3,300,352 to 3,301,653
_2957
PfGW456L13_2958 - hypothetical protein, at 3,301,701 to 3,302,462
_2958
Group
Condition
PfGW456L13
_2954
PfGW456L13
_2955
PfGW456L13
_2956
PfGW456L13
_2957
PfGW456L13
_2958
stress
Lomefloxacin 0.0004 mM
-2.9
-2.2
-2.6
-2.7
+0.6
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-2.0
-2.2
-1.5
-1.7
-0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-1.5
-2.8
-1.4
-1.3
+0.0
nitrogen source
D-Serine (N)
+0.9
+1.3
-3.5
-4.4
+0.2
carbon source
octanoate (C)
-0.9
-2.5
-0.8
-0.4
-0.2
stress
Vancomycin 0.5 mg/ml
+0.1
+0.2
-2.3
-1.8
+0.1
carbon source
D-Serine (C)
-0.3
-0.5
-1.6
-1.3
+0.1
stress
Zinc 1 mM
-0.7
-1.3
-0.2
-0.7
-0.1
stress
Vancomycin 0.25 mg/ml
+0.0
+0.1
-1.2
-1.7
-0.2
control
LB control
-0.2
-1.2
-0.6
-0.9
+0.1
stress
Bacitracin 1 mg/ml
-0.0
+0.6
-2.3
-1.0
+0.0
carbon source
D-Serine (C)
+0.3
-0.4
-1.3
-1.1
-0.1
carbon source
L-Malic (C)
-0.1
-1.3
-0.1
-0.2
-0.5
carbon source
a-Ketoglutaric (C)
-0.0
-1.2
-0.1
-1.0
+0.1
control
LB control
-0.6
-0.5
-0.3
-0.6
-0.2
stress
Fusidic 0.03 mg/ml
+0.2
+0.2
-1.5
-1.1
+0.0
carbon source
D-Galactose (C)
-0.3
-1.0
-0.8
+0.4
-0.5
stress
Cephalothin 3 mg/ml
-0.2
-0.4
-0.8
-0.6
-0.0
control
LB control
-0.3
-0.5
-0.6
-0.8
+0.1
stress
Bacitracin 0.5 mg/ml
-0.3
+0.4
-0.8
-1.2
+0.3
stress
Fusidic 0.08 mg/ml
+1.0
+1.3
-1.8
-2.0
+0.1
stress
Aluminum chloride 5 mM
+0.1
+0.8
-1.3
-0.6
-0.3
stress
Vancomycin 0.125 mg/ml
-0.0
+0.4
-1.1
-0.7
+0.1
carbon source
Glycerol (C)
-0.0
-1.5
-0.0
+0.6
-0.3
carbon source
D,L-Lactate (C)
-0.1
-1.1
-0.5
+0.6
-0.1
carbon source
L-Valine (C)
-0.1
-1.3
+0.1
+0.4
-0.2
stress
Aluminum chloride 2.5 mM
+0.4
+0.3
-1.2
-0.5
-0.1
carbon source
D-Fructose (C)
-0.1
-0.3
-0.7
+0.6
-0.3
carbon source
L-Tryptophan (C)
+1.1
+0.6
+0.9
+1.6
+0.0
carbon source
L-Tryptophan (C)
+1.2
+1.3
+1.4
+1.7
+0.0
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