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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2929 and PfGW456L13_2930 are separated by 144 nucleotides
PfGW456L13_2930 and PfGW456L13_2931 are separated by 162 nucleotides
PfGW456L13_2931 and PfGW456L13_2932 are separated by 234 nucleotides
PfGW456L13_2932 and PfGW456L13_2933 are separated by 112 nucleotides
PfGW456L13_2929 - Lactoylglutathione lyase (EC 4.4.1.5), at 3,266,898 to 3,267,419
_2929
PfGW456L13_2930 - FIG00953950: hypothetical protein, at 3,267,564 to 3,268,082
_2930
PfGW456L13_2931 - transcriptional regulator MvaT, P16 subunit, putative, at 3,268,245 to 3,268,610
_2931
PfGW456L13_2932 - Rtn protein, at 3,268,845 to 3,270,377
_2932
PfGW456L13_2933 - LysR family transcriptional regulator STM2281, at 3,270,490 to 3,271,362
_2933
Group
Condition
PfGW456L13
_2929
PfGW456L13
_2930
PfGW456L13
_2931
PfGW456L13
_2932
PfGW456L13
_2933
carbon source
Trisodium citrate (C)
-0.2
+0.2
-0.9
+0.5
-4.5
carbon source
L-Glutamine (C)
-0.6
-0.3
-1.0
-0.3
-1.2
carbon source
L-Lactate (C)
+0.6
-0.1
-2.9
-0.2
-0.6
carbon source
D-Fructose (C)
+0.3
-0.3
-0.6
-0.2
-1.6
carbon source
D-Glucose (C)
+0.5
+0.2
-2.6
-0.3
-0.1
carbon source
D-Fructose (C)
+0.4
+0.5
-0.2
-0.1
-2.7
nitrogen source
L-Isoleucine (N)
+0.1
+0.1
-2.0
-0.1
-0.2
nitrogen source
Gly-DL-Asp (N)
+0.2
-0.4
-1.0
-0.3
-0.4
carbon source
L-Valine (C)
+0.1
+0.3
-1.8
-0.2
-0.4
nitrogen source
L-Leucine (N)
+0.3
-0.1
-1.6
-0.1
-0.5
carbon source
octanoate (C)
+0.2
-0.2
-1.7
-0.3
+0.1
carbon source
D-Lactate (C)
-0.4
+0.1
+0.2
-0.2
-1.5
carbon source
Glycerol (C)
-0.1
-0.7
+0.7
-0.0
-1.5
carbon source
L-Tryptophan (C)
-0.0
+0.4
-1.1
-0.2
-0.7
carbon source
D-Glucosamine Hydrochloride (C)
+0.1
-0.2
-1.5
-0.1
+0.1
carbon source
Tween 20 (C)
+0.2
-0.2
-1.2
+0.3
-0.6
nitrogen source
Ammonium chloride (N)
-0.2
+0.4
-0.7
-0.2
-0.5
carbon source
D-Alanine (C)
+0.5
+0.2
-0.6
-0.3
-1.1
carbon source
D-Gluconic Acid (C)
+0.2
+0.3
-0.9
-0.1
-0.6
carbon source
L-Tryptophan (C)
-0.1
-0.2
+0.3
+0.1
-1.2
carbon source
D-Galactose (C)
+0.1
+0.3
-0.9
+0.1
-0.5
carbon source
D-Mannose (C)
+0.3
+0.3
-0.8
-0.1
-0.4
carbon source
L-Histidine (C)
-0.3
-0.2
+0.9
-0.0
-0.7
carbon source
D,L-Lactate (C)
+0.2
-0.3
+0.5
-0.1
-0.6
carbon source
D-Gluconic Acid (C)
+0.5
-0.5
+0.8
+0.2
-0.9
carbon source
Putrescine (C)
+0.0
-1.0
+0.8
-0.0
+0.2
carbon source
L-Arabinose (C)
+0.5
-0.3
+0.7
+0.3
-1.1
stress
Paraquat dichloride 0.032 mg/ml
-0.1
-0.2
+0.8
+0.1
+0.8
stress
Cobalt chloride 0.16 mM
+0.2
-0.1
+1.2
+0.1
+0.6
carbon source
D-Lactate (C)
+0.2
+0.4
+1.7
-0.2
+0.2
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