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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2925 and PfGW456L13_2926 are separated by 430 nucleotides
PfGW456L13_2926 and PfGW456L13_2927 are separated by 139 nucleotides
PfGW456L13_2927 and PfGW456L13_2928 are separated by 139 nucleotides
PfGW456L13_2928 and PfGW456L13_2929 are separated by 358 nucleotides
PfGW456L13_2925 - Cointegrate resolution protein T, at 3,261,755 to 3,262,765
_2925
PfGW456L13_2926 - Cointegrate resolution protein S, at 3,263,196 to 3,264,134
_2926
PfGW456L13_2927 - Alkyl hydroperoxide reductase protein C (EC 1.6.4.-), at 3,264,274 to 3,264,837
_2927
PfGW456L13_2928 - Alkyl hydroperoxide reductase protein F (EC 1.6.4.-), at 3,264,977 to 3,266,539
_2928
PfGW456L13_2929 - Lactoylglutathione lyase (EC 4.4.1.5), at 3,266,898 to 3,267,419
_2929
Group
Condition
PfGW456L13
_2925
PfGW456L13
_2926
PfGW456L13
_2927
PfGW456L13
_2928
PfGW456L13
_2929
carbon source
D-Galactose (C)
-2.9
+0.1
-0.3
-0.1
+0.1
stress
D-Cycloserine 0.125 mg/ml
-0.7
+0.2
-2.2
-0.4
+0.1
carbon source
a-Ketoglutaric (C)
-1.5
-0.2
-0.4
-0.5
+0.0
carbon source
L-Lactate (C)
-2.3
+0.1
-0.2
-0.3
+0.6
stress
Vancomycin 0.125 mg/ml
-0.8
-0.1
-0.4
+0.1
-0.5
carbon source
D-Mannose (C)
-0.8
-0.1
-0.7
-0.3
+0.3
stress
nitrate 200 mM
-0.1
-0.1
-0.6
-0.2
-0.4
stress
Vancomycin 0.5 mg/ml
-0.8
-0.2
-0.7
-0.0
+0.2
carbon source
L-Glutamine (C)
-0.7
+0.0
+0.2
-0.4
-0.6
stress
Aluminum chloride 5 mM
-0.7
+0.2
-0.1
-0.3
-0.3
carbon source
D-Serine (C)
-0.6
+0.1
-0.4
-0.2
-0.0
carbon source
L-Valine (C)
-1.2
-0.1
+0.1
-0.1
+0.2
carbon source
D-Gluconic Acid (C)
-0.9
+0.3
-0.1
-0.4
+0.2
nitrogen source
L-Asparagine (N)
-1.2
-0.0
+0.1
+0.1
+0.1
stress
Vancomycin 0.25 mg/ml
-0.6
-0.1
-0.5
+0.0
+0.3
nitrogen source
L-Leucine (N)
-0.9
-0.1
+0.0
+0.2
+0.3
carbon source
D-Fructose (C)
-0.4
+0.2
-0.5
-0.2
+0.4
stress
Aluminum chloride 2.5 mM
+0.4
+0.2
-0.6
-0.4
+0.1
carbon source
D-Serine (C)
+0.5
-0.2
-0.3
-0.3
+0.2
carbon source
D-Gluconic Acid (C)
-0.5
-0.0
+0.3
-0.2
+0.5
carbon source
D-Galactose (C)
-0.2
-0.1
+0.2
-0.4
+0.5
carbon source
Tween 20 (C)
+0.3
+0.3
-0.4
-0.3
+0.2
carbon source
D-Lactate (C)
+0.5
+0.1
+0.2
-0.4
-0.4
carbon source
D-Lactate (C)
+0.7
-0.1
-0.3
-0.3
+0.2
carbon source
a-Ketoglutaric (C)
+1.0
-0.1
-0.5
-0.1
+0.2
carbon source
D-Fructose (C)
+0.9
-0.2
+0.1
-0.1
+0.3
carbon source
D-Glucosamine Hydrochloride (C)
+0.8
+0.2
+0.1
-0.2
+0.2
carbon source
L-Histidine (C)
+0.6
-0.1
+0.9
+0.3
-0.3
carbon source
L-Arabinose (C)
+0.9
-0.0
+0.1
+0.0
+0.5
carbon source
D,L-Lactate (C)
+1.4
-0.0
-0.1
-0.0
+0.2
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