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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2911 and PfGW456L13_2912 are separated by 122 nucleotides
PfGW456L13_2912 and PfGW456L13_2913 are separated by 154 nucleotides
PfGW456L13_2913 and PfGW456L13_2914 are separated by 0 nucleotides
PfGW456L13_2914 and PfGW456L13_2915 are separated by 87 nucleotides
PfGW456L13_2911 - Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1), at 3,251,413 to 3,252,180
_2911
PfGW456L13_2912 - Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9), at 3,252,303 to 3,253,370
_2912
PfGW456L13_2913 - Alcohol dehydrogenase (EC 1.1.1.1), at 3,253,525 to 3,254,508
_2913
PfGW456L13_2914 - ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63), at 3,254,509 to 3,255,573
_2914
PfGW456L13_2915 - Alkylated DNA repair protein AlkB, at 3,255,661 to 3,256,326
_2915
Group
Condition
PfGW456L13
_2911
PfGW456L13
_2912
PfGW456L13
_2913
PfGW456L13
_2914
PfGW456L13
_2915
carbon source
Putrescine (C)
-0.3
+0.6
-0.5
-2.2
-0.9
carbon source
D-Fructose (C)
-0.2
+0.2
-1.1
-0.3
-0.4
carbon source
Trisodium citrate (C)
-0.5
-0.5
+0.1
-0.2
-0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.6
-0.1
-0.5
-0.2
+0.2
nitrogen source
L-Leucine (N)
-0.1
+0.1
-0.8
+0.2
-0.1
carbon source
D-Lactate (C)
+0.1
+0.6
-0.0
-1.6
+0.2
carbon source
L-Glutamine (C)
-0.1
+0.3
-0.4
-0.4
-0.1
stress
A22 0.04 mg/ml
-0.2
-0.4
+0.5
-0.1
-0.3
carbon source
a-Ketoglutaric (C)
+0.0
+0.3
-0.1
-0.6
+0.1
carbon source
L-Malic (C)
-0.1
+0.2
-0.7
+0.5
-0.1
carbon source
D-Glucosamine Hydrochloride (C)
-0.1
+0.3
-0.2
-0.6
+0.3
carbon source
octanoate (C)
-0.2
+0.1
+0.1
-0.6
+0.3
carbon source
D-Fructose (C)
-0.6
+0.0
+0.3
+0.3
-0.0
carbon source
L-Tryptophan (C)
-0.1
-0.2
+0.5
-0.3
+0.1
stress
Dimethyl Sulfoxide 7.5 vol%
-0.4
+0.2
+0.4
+0.1
-0.3
carbon source
D-Mannose (C)
-0.1
+0.6
+0.0
-0.5
-0.1
carbon source
L-Phenylalanine (C)
-0.0
+0.4
+0.3
-0.8
+0.1
carbon source
L-Lactate (C)
+0.0
+0.2
-0.6
+0.4
-0.1
carbon source
a-Ketoglutaric (C)
-0.3
+0.6
-0.4
+0.5
-0.3
stress
Vancomycin 0.25 mg/ml
-0.2
+0.2
+0.7
+0.0
-0.5
nitrogen source
Gly-DL-Asp (N)
+0.0
+0.3
-0.8
+0.5
+0.1
carbon source
Glycerol (C)
-0.5
+0.1
+0.2
+0.4
+0.4
lb
LB
+0.0
-0.1
+0.3
+0.5
-0.2
nitrogen source
Glycine (N)
+0.0
+0.1
+0.3
+0.5
-0.3
carbon source
D-Glucose (C)
-0.3
+0.0
+0.5
+0.4
+0.2
nitrogen source
Gly-Glu (N)
+0.1
+0.4
-0.4
+0.6
+0.0
nitrogen source
L-Asparagine (N)
-0.3
+0.3
-0.1
+0.8
+0.1
carbon source
L-Histidine (C)
-0.0
+0.5
+0.3
+0.3
-0.2
carbon source
L-Malic (C)
-0.3
+0.5
+0.2
+0.3
+0.6
stress
Lomefloxacin 0.0004 mM
-0.5
+0.4
+0.8
+0.4
+0.1
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