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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2898 and PfGW456L13_2899 are separated by 1187 nucleotides
PfGW456L13_2899 and PfGW456L13_2900 are separated by 165 nucleotides
PfGW456L13_2900 and PfGW456L13_2901 are separated by 299 nucleotides
PfGW456L13_2901 and PfGW456L13_2902 are separated by 235 nucleotides
PfGW456L13_2898 - Integral membrane protein TerC, at 3,236,278 to 3,237,219
_2898
PfGW456L13_2899 - FIG00761799: membrane protein, at 3,238,407 to 3,239,711
_2899
PfGW456L13_2900 - Pyoverdine chromophore precursor synthetase PvdL @ Siderophore biosynthesis non-ribosomal peptide synthetase modules, at 3,239,877 to 3,242,714
_2900
PfGW456L13_2901 - Cardiolipin synthetase (EC 2.7.8.-), at 3,243,014 to 3,244,726
_2901
PfGW456L13_2902 - FIG01200315: hypothetical protein, at 3,244,962 to 3,245,567
_2902
Group
Condition
PfGW456L13
_2898
PfGW456L13
_2899
PfGW456L13
_2900
PfGW456L13
_2901
PfGW456L13
_2902
carbon source
D-Fructose (C)
-0.1
-0.3
-0.2
-0.1
+0.1
stress
Fusidic 0.08 mg/ml
-0.3
-0.1
-0.1
-0.1
-0.1
carbon source
L-Malic (C)
-0.4
-0.1
+0.1
-0.1
-0.1
stress
Fusidic 0.03 mg/ml
-0.3
-0.1
-0.1
+0.0
-0.2
carbon source
D-Fructose (C)
-0.2
+0.0
-0.1
-0.2
+0.0
carbon source
L-Malic (C)
-0.4
-0.1
+0.1
-0.1
+0.1
stress
Cephalothin 3 mg/ml
-0.2
-0.1
+0.0
-0.2
+0.0
carbon source
D-Alanine (C)
-0.3
+0.1
-0.0
-0.1
-0.1
carbon source
L-Lactate (C)
+0.0
-0.0
-0.2
-0.3
+0.1
nitrogen source
L-Citrulline (N)
-0.2
+0.1
-0.1
-0.1
-0.1
carbon source
L-Arabinose (C)
-0.3
+0.0
+0.1
-0.2
+0.0
carbon source
L-Glutamine (C)
-0.3
-0.0
-0.1
+0.1
-0.0
nitrogen source
Gly-Glu (N)
-0.3
+0.0
-0.0
+0.1
-0.1
carbon source
octanoate (C)
-0.4
-0.3
+0.2
-0.0
+0.2
carbon source
D-Alanine (C)
-0.1
+0.1
-0.1
-0.3
+0.0
carbon source
Glycerol (C)
-0.3
+0.2
+0.0
-0.1
-0.1
carbon source
D-Galactose (C)
+0.2
-0.2
-0.0
-0.2
+0.0
carbon source
D-Gluconic Acid (C)
-0.2
+0.1
+0.1
-0.1
+0.1
nitrogen source
L-Asparagine (N)
-0.2
+0.2
+0.0
+0.0
-0.1
stress
Lomefloxacin 0.0004 mM
+0.2
-0.3
-0.1
-0.1
+0.2
carbon source
L-Arabinose (C)
+0.0
+0.1
+0.1
-0.2
-0.1
carbon source
L-Glutamine (C)
-0.1
+0.1
+0.0
+0.1
-0.2
carbon source
Trisodium citrate (C)
+0.3
-0.2
+0.1
-0.2
+0.1
carbon source
Putrescine (C)
+0.2
+0.1
-0.2
+0.1
-0.2
carbon source
a-Ketoglutaric (C)
-0.4
+0.2
+0.1
+0.2
-0.1
carbon source
Tween 20 (C)
-0.1
-0.1
+0.0
+0.1
+0.3
stress
Thallium(I) acetate 0.004 mg/ml
+0.1
+0.1
+0.1
-0.2
+0.1
carbon source
D-Serine (C)
-0.1
+0.2
+0.0
+0.2
+0.0
carbon source
a-Ketoglutaric (C)
+0.3
-0.2
+0.2
+0.1
-0.2
stress
Zinc 1 mM
+0.2
+0.2
+0.1
-0.1
+0.1
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