Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_2873 and PfGW456L13_2874 are separated by 7 nucleotidesPfGW456L13_2874 and PfGW456L13_2875 are separated by 286 nucleotidesPfGW456L13_2875 and PfGW456L13_2876 are separated by 154 nucleotidesPfGW456L13_2876 and PfGW456L13_2877 are separated by 13 nucleotides PfGW456L13_2873 - D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30), at 3,199,649 to 3,200,422 _2873 PfGW456L13_2874 - D-beta-hydroxybutyrate permease, at 3,200,430 to 3,201,821 _2874 PfGW456L13_2875 - Sigma-54 dependent transcriptional regulator, at 3,202,108 to 3,203,523 _2875 PfGW456L13_2876 - Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1), at 3,203,678 to 3,205,255 _2876 PfGW456L13_2877 - Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1), at 3,205,269 to 3,206,291 _2877
Group Condition PfGW456L13_2873 PfGW456L13_2874 PfGW456L13_2875 PfGW456L13_2876 PfGW456L13_2877
carbon source L-Phenylalanine (C) -2.2 -2.2 -3.1 -0.1 -0.1
carbon source L-Phenylalanine (C) -1.5 -1.2 -2.4 +0.0 -0.0
carbon source L-Valine (C) -0.8 -0.6 -0.7 -0.1 -0.3
carbon source L-Valine (C) -0.6 -0.4 -0.7 -0.1 -0.0
carbon source D,L-Lactate (C) -0.6 -0.7 -0.3 +0.1 +0.2
carbon source L-Arabinose (C) -0.1 -0.8 -0.3 -0.0 +0.1
stress nitrite 10 mM -0.2 -0.3 -0.2 -0.2 -0.2
carbon source D-Galactose (C) -0.1 -0.5 -0.2 -0.2 +0.1
carbon source D-Lactate (C) -0.7 -0.1 +0.1 -0.3 +0.0
carbon source Glycerol (C) +0.2 -0.3 -0.1 -0.1 -0.5
lb LB +0.5 -0.9 +0.1 -0.2 -0.0
carbon source a-Ketoglutaric (C) -0.7 +0.3 -0.1 +0.1 +0.2
carbon source L-Asparagine (C) -0.2 -0.3 -0.1 +0.2 +0.1
nitrogen source L-Asparagine (N) -0.2 +0.3 -0.1 -0.1 -0.1
carbon source L-Asparagine (C) +0.2 -0.3 -0.2 -0.1 +0.1
stress Aluminum chloride 2.5 mM +0.1 -0.5 -0.1 +0.2 +0.1
stress Thallium(I) acetate 0.002 mg/ml -0.4 +0.4 +0.1 -0.1 -0.1
nitrogen source Gly-Glu (N) -0.3 +0.4 +0.0 -0.2 +0.1
stress Lomefloxacin 0.0004 mM +0.0 -0.5 +0.5 +0.2 -0.1
nitrogen source Uridine (N) -0.3 +0.3 +0.1 +0.1 -0.1
carbon source L-Arabinose (C) +0.2 -0.2 +0.1 +0.2 -0.1
carbon source L-Malic (C) -0.1 -0.4 +0.4 +0.0 +0.3
stress Paraquat dichloride 0.032 mg/ml -0.3 +0.5 +0.2 +0.1 +0.1
carbon source L-Tryptophan (C) -0.1 +0.4 +0.0 +0.3 +0.1
carbon source D-Glucose (C) -0.1 +0.3 +0.1 +0.3 +0.1
stress Bacitracin 1 mg/ml +0.2 +0.4 +0.1 +0.2 -0.0
stress Fusidic 0.08 mg/ml +0.3 +0.3 -0.0 +0.0 +0.3
carbon source D-Gluconic Acid (C) +0.7 -0.1 +0.1 -0.1 +0.3
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x +0.4 +0.2 +0.2 +0.2 +0.0
carbon source succinate (C) +0.5 +0.4 +0.3 -0.1 +0.3
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