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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2844 and PfGW456L13_2845 are separated by 6 nucleotides
PfGW456L13_2845 and PfGW456L13_2846 are separated by 271 nucleotides
PfGW456L13_2846 and PfGW456L13_2847 are separated by 117 nucleotides
PfGW456L13_2847 and PfGW456L13_2848 are separated by 156 nucleotides
PfGW456L13_2844 - Periplasmic sugar-binding domain protein, at 3,154,151 to 3,155,236
_2844
PfGW456L13_2845 - FIG00953703: hypothetical protein, at 3,155,243 to 3,155,461
_2845
PfGW456L13_2846 - hypothetical protein, at 3,155,733 to 3,162,215
_2846
PfGW456L13_2847 - 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), at 3,162,333 to 3,166,043
_2847
PfGW456L13_2848 - cis/trans isomerase, at 3,166,200 to 3,168,509
_2848
Group
Condition
PfGW456L13
_2844
PfGW456L13
_2845
PfGW456L13
_2846
PfGW456L13
_2847
PfGW456L13
_2848
carbon source
a-Ketoglutaric (C)
-0.5
-1.3
-0.0
-1.1
+0.1
carbon source
L-Glutamine (C)
-0.3
-2.3
-0.0
+0.1
+0.1
carbon source
D-Fructose (C)
+0.2
-1.3
-0.2
-0.8
+0.1
nitrogen source
L-Citrulline (N)
-0.1
-1.2
-0.0
-0.6
+0.2
nitrogen source
L-Glutamic (N)
+0.0
-1.1
-0.0
-0.6
+0.1
carbon source
D-Lactate (C)
-0.4
-0.2
+0.1
-1.0
-0.0
carbon source
D-Fructose (C)
-0.1
-1.0
+0.0
-0.7
+0.2
nitrogen source
L-Leucine (N)
-0.6
-1.0
+0.1
-0.2
+0.1
stress
Benzethonium chloride 0.0125 mM
+0.1
-1.7
+0.1
-0.2
+0.1
nitrogen source
L-Proline (N)
-0.1
-0.6
+0.1
-1.1
+0.3
carbon source
D-Glucosamine Hydrochloride (C)
-0.3
-1.6
+0.0
+0.3
+0.1
carbon source
a-Ketoglutaric (C)
-0.7
+0.4
+0.2
-1.0
-0.2
carbon source
Putrescine (C)
+0.3
-1.3
-0.0
-0.1
+0.1
carbon source
Glycerol (C)
-0.6
+0.5
-0.0
-0.7
+0.2
carbon source
D-Gluconic Acid (C)
-0.2
+0.5
-0.3
-0.8
+0.2
carbon source
D-Galactose (C)
-0.2
+0.6
+0.1
-0.8
-0.2
carbon source
D-Lactate (C)
-0.0
+0.7
+0.0
-1.3
+0.1
carbon source
L-Lactate (C)
-0.1
+0.7
+0.2
-1.1
+0.1
carbon source
Trisodium citrate (C)
-0.7
+0.5
+0.2
-0.4
+0.1
carbon source
Glycerol (C)
-0.3
+0.8
-0.1
-0.7
+0.1
carbon source
L-Tryptophan (C)
+0.2
-0.8
-0.1
+0.4
+0.2
nitrogen source
D-Alanine (N)
-0.4
+0.6
+0.0
-0.5
+0.2
carbon source
D,L-Lactate (C)
+0.3
+1.0
-0.0
-1.1
+0.0
lb
LB
-0.3
+1.1
-0.1
-0.1
+0.1
carbon source
D-Alanine (C)
-0.2
+1.1
-0.0
-0.3
+0.2
carbon source
D-Glucosamine Hydrochloride (C)
-0.6
+1.0
+0.1
+0.5
+0.0
carbon source
D-Gluconic Acid (C)
+0.1
+1.5
-0.0
-0.8
+0.3
carbon source
octanoate (C)
-0.6
+1.1
-0.0
+0.8
-0.1
carbon source
L-Phenylalanine (C)
-0.3
+1.1
+0.1
+0.4
+0.2
carbon source
L-Phenylalanine (C)
+0.3
+1.2
+0.1
+0.5
+0.1
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