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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2827 and PfGW456L13_2828 are separated by 16 nucleotides
PfGW456L13_2828 and PfGW456L13_2829 overlap by 4 nucleotides
PfGW456L13_2829 and PfGW456L13_2830 are separated by 1 nucleotides
PfGW456L13_2830 and PfGW456L13_2831 are separated by 140 nucleotides
PfGW456L13_2827 - ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1), at 3,133,693 to 3,134,760
_2827
PfGW456L13_2828 - Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1), at 3,134,777 to 3,135,565
_2828
PfGW456L13_2829 - Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1), at 3,135,562 to 3,136,479
_2829
PfGW456L13_2830 - Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1), at 3,136,481 to 3,137,566
_2830
PfGW456L13_2831 - Transcriptional regulator, GntR family, at 3,137,707 to 3,138,396
_2831
Group
Condition
PfGW456L13
_2827
PfGW456L13
_2828
PfGW456L13
_2829
PfGW456L13
_2830
PfGW456L13
_2831
carbon source
D,L-Lactate (C)
+0.0
-0.2
+0.1
-0.2
-2.0
carbon source
L-Arabinose (C)
-0.2
-0.6
-0.1
-0.1
-1.1
nitrogen source
L-Serine (N)
-0.2
-0.1
-0.1
-0.1
-1.1
carbon source
D-Galactose (C)
-0.2
-0.2
-0.5
-0.2
-0.3
carbon source
L-Arabinose (C)
-0.0
-0.2
-0.3
-0.4
-0.5
nitrogen source
L-Arginine (N)
-0.0
+0.1
-0.2
-0.2
-0.8
nitrogen source
L-Isoleucine (N)
-0.1
-0.1
-0.2
-0.3
-0.4
nitrogen source
L-Leucine (N)
-0.1
-0.1
-0.1
-0.1
-0.6
nitrogen source
L-Valine (N)
-0.1
-0.0
-0.3
-0.3
-0.5
nitrogen source
L-Lysine (N)
-0.1
-0.1
-0.2
-0.4
-0.3
carbon source
D-Galactose (C)
-0.1
-0.1
+0.1
-0.1
-0.9
stress
Vancomycin 0.5 mg/ml
+0.0
-0.1
-0.2
-0.3
-0.5
carbon source
a-Ketoglutaric (C)
+0.2
-0.1
-0.3
-0.4
-0.5
carbon source
Tween 20 (C)
+0.1
-0.0
-0.0
-0.2
-0.8
carbon source
Glycerol (C)
-0.0
+0.1
+0.3
-0.1
-1.3
nitrogen source
L-Threonine (N)
-0.0
+0.3
-0.2
-0.2
-0.8
carbon source
D-Mannose (C)
+0.1
-0.1
+0.1
-0.1
-0.9
carbon source
D-Lactate (C)
-0.3
-0.1
+0.3
-0.2
-0.5
nitrogen source
Uridine (N)
-0.0
+0.2
-0.2
-0.2
-0.6
nitrogen source
L-Histidine (N)
+0.1
+0.2
+0.0
-0.2
-0.5
nitrogen source
NAG (N)
+0.1
+0.3
-0.0
-0.1
-0.7
carbon source
D-Fructose (C)
-0.0
-0.2
+0.5
-0.2
-0.5
carbon source
L-Glutamine (C)
-0.2
-0.3
-0.3
+0.2
+0.2
carbon source
Trisodium citrate (C)
+0.0
-0.8
+0.2
-0.2
+0.4
carbon source
a-Ketoglutaric (C)
-0.0
+0.1
+0.1
+0.5
-0.7
carbon source
Putrescine (C)
-0.2
+0.1
-0.4
-0.2
+0.8
carbon source
L-Glutamine (C)
-0.1
+0.1
+0.1
-0.2
+0.7
carbon source
octanoate (C)
+0.2
+0.1
-0.1
-0.1
+0.7
carbon source
L-Malic (C)
+0.1
+0.2
-0.0
-0.1
+0.8
stress
Lomefloxacin 0.0004 mM
+0.3
+0.6
-0.6
+0.3
+0.5
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