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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2826 and PfGW456L13_2827 overlap by 11 nucleotides
PfGW456L13_2827 and PfGW456L13_2828 are separated by 16 nucleotides
PfGW456L13_2828 and PfGW456L13_2829 overlap by 4 nucleotides
PfGW456L13_2829 and PfGW456L13_2830 are separated by 1 nucleotides
PfGW456L13_2826 - hypothetical protein, at 3,133,548 to 3,133,703
_2826
PfGW456L13_2827 - ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1), at 3,133,693 to 3,134,760
_2827
PfGW456L13_2828 - Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1), at 3,134,777 to 3,135,565
_2828
PfGW456L13_2829 - Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1), at 3,135,562 to 3,136,479
_2829
PfGW456L13_2830 - Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1), at 3,136,481 to 3,137,566
_2830
Group
Condition
PfGW456L13
_2826
PfGW456L13
_2827
PfGW456L13
_2828
PfGW456L13
_2829
PfGW456L13
_2830
carbon source
D-Fructose (C)
-4.2
-0.0
-0.2
+0.5
-0.2
stress
Lomefloxacin 0.0004 mM
-3.6
+0.3
+0.6
-0.6
+0.3
stress
Vancomycin 0.5 mg/ml
-1.2
+0.0
-0.1
-0.2
-0.3
carbon source
L-Phenylalanine (C)
-1.2
-0.0
-0.3
-0.0
-0.1
carbon source
L-Alanine (C)
-1.5
-0.1
-0.2
-0.1
+0.1
carbon source
L-Lactate (C)
-1.2
-0.0
-0.2
-0.0
-0.2
carbon source
L-Glutamine (C)
-1.0
-0.2
-0.3
-0.3
+0.2
nitrogen source
L-Serine (N)
-1.0
-0.2
-0.1
-0.1
-0.1
carbon source
D-Glucosamine Hydrochloride (C)
-1.3
-0.0
-0.1
-0.1
+0.1
nitrogen source
L-Lysine (N)
-0.6
-0.1
-0.1
-0.2
-0.4
carbon source
Glycerol (C)
-1.7
-0.0
+0.1
+0.3
-0.1
stress
Dimethyl Sulfoxide 7.5 vol%
-1.3
+0.1
+0.0
+0.1
-0.2
carbon source
D-Lactate (C)
-0.9
-0.3
-0.1
+0.3
-0.2
carbon source
D-Gluconic Acid (C)
-0.8
+0.0
-0.4
+0.2
-0.1
carbon source
Putrescine (C)
-0.3
-0.2
+0.1
-0.4
-0.2
carbon source
D-Galactose (C)
-0.8
-0.1
-0.1
+0.1
-0.1
carbon source
Trisodium citrate (C)
-0.1
+0.0
-0.8
+0.2
-0.2
carbon source
a-Ketoglutaric (C)
-0.4
+0.2
-0.1
-0.3
-0.4
stress
Nickel (II) chloride 1 mM
-0.8
-0.0
+0.2
-0.4
+0.1
carbon source
L-Arabinose (C)
+0.2
-0.2
-0.6
-0.1
-0.1
nitrogen source
L-Threonine (N)
-0.7
-0.0
+0.3
-0.2
-0.2
stress
Thallium(I) acetate 0.004 mg/ml
-0.9
-0.1
+0.1
-0.1
+0.2
stress
A22 0.04 mg/ml
-1.0
+0.1
+0.0
-0.0
+0.2
carbon source
D-Gluconic Acid (C)
-1.2
+0.0
+0.1
+0.4
+0.1
carbon source
L-Histidine (C)
-0.7
+0.1
+0.0
+0.2
-0.1
carbon source
D-Fructose (C)
+1.0
-0.2
-0.0
-0.4
+0.1
carbon source
octanoate (C)
+0.7
+0.2
+0.1
-0.1
-0.1
carbon source
D-Glucosamine Hydrochloride (C)
+1.2
-0.2
-0.3
+0.2
+0.1
stress
nitrite 10 mM
+1.0
-0.0
+0.1
+0.1
+0.1
stress
nitrate 200 mM
+0.8
-0.0
+0.1
+0.3
-0.0
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