Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_275 and PfGW456L13_276 are separated by 151 nucleotidesPfGW456L13_276 and PfGW456L13_277 are separated by 31 nucleotidesPfGW456L13_277 and PfGW456L13_278 are separated by 13 nucleotidesPfGW456L13_278 and PfGW456L13_279 overlap by 4 nucleotides PfGW456L13_275 - 3-dehydroquinate synthase (EC 4.2.3.4), at 322,813 to 323,913 _275 PfGW456L13_276 - Shikimate kinase I (EC 2.7.1.71), at 324,065 to 324,556 _276 PfGW456L13_277 - Type IV pilus biogenesis protein PilQ, at 324,588 to 326,657 _277 PfGW456L13_278 - Type IV pilus biogenesis protein PilP, at 326,671 to 327,198 _278 PfGW456L13_279 - Type IV pilus biogenesis protein PilO, at 327,195 to 327,818 _279
Group Condition PfGW456L13_275 PfGW456L13_276 PfGW456L13_277 PfGW456L13_278 PfGW456L13_279
nitrogen source L-Phenylalanine (N) -4.1 -4.1 +0.1 -0.2 -0.1
carbon source Glycerol (C) -4.1 -3.5 -0.0 -0.2 -0.3
nitrogen source L-Arginine (N) -3.9 -4.1 +0.1 +0.0 -0.2
carbon source D-Serine (C) -3.8 -3.7 +0.1 -0.3 -0.2
carbon source L-Histidine (C) -3.9 -3.8 -0.0 -0.2 +0.0
carbon source L-Histidine (C) -4.2 -3.6 -0.2 -0.2 +0.3
carbon source Trisodium citrate (C) -3.9 -3.4 -0.2 +0.5 -0.7
carbon source L-Asparagine (C) -3.9 -3.7 +0.0 +0.0 -0.1
nitrogen source Glycine (N) -3.8 -3.9 -0.0 +0.1 -0.1
nitrogen source NAG (N) -3.7 -3.9 -0.1 +0.1 -0.1
carbon source D-Serine (C) -4.0 -3.4 +0.2 -0.2 -0.2
carbon source L-Tryptophan (C) -3.7 -3.6 +0.1 -0.2 +0.1
carbon source D-Alanine (C) -4.0 -3.4 +0.1 -0.2 +0.1
carbon source Tween 20 (C) -3.7 -3.7 +0.2 -0.1 +0.0
carbon source L-Malic (C) -3.6 -3.7 +0.2 -0.5 +0.3
carbon source D-Gluconic Acid (C) -3.8 -3.4 +0.1 -0.5 +0.2
carbon source D-Lactate (C) -3.8 -3.4 +0.3 +0.1 -0.5
nitrogen source L-Valine (N) -3.6 -3.8 +0.1 +0.2 -0.1
carbon source casaminos (C) -4.0 -3.4 +0.0 -0.1 +0.3
carbon source L-Arabinose (C) -3.8 -3.4 -0.1 -0.2 +0.4
carbon source L-Valine (C) -4.0 -3.4 +0.2 +0.1 +0.2
nitrogen source nitrate (N) -3.5 -3.7 +0.1 -0.2 +0.4
nitrogen source L-Tryptophan (N) -3.6 -3.7 +0.0 +0.3 +0.1
nitrogen source L-Histidine (N) -3.5 -3.8 -0.1 +0.1 +0.4
carbon source succinate (C) -3.5 -3.6 -0.2 +0.2 +0.5
carbon source D-Fructose (C) -3.7 -3.3 +0.1 +0.0 +0.5
carbon source L-Malic (C) -3.7 -3.3 +0.1 +0.3 +0.3
carbon source a-Ketoglutaric (C) -3.5 -3.4 +0.2 -0.5 +0.9
nitrogen source D-Serine (N) -3.4 -3.6 +0.1 +0.3 +0.3
carbon source Glycerol (C) -3.5 -3.5 +0.3 +0.3 +0.4
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