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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2741 and PfGW456L13_2742 are separated by 81 nucleotides
PfGW456L13_2742 and PfGW456L13_2743 are separated by 861 nucleotides
PfGW456L13_2743 and PfGW456L13_2744 are separated by 236 nucleotides
PfGW456L13_2744 and PfGW456L13_2745 are separated by 137 nucleotides
PfGW456L13_2741 - hypothetical protein, at 3,039,091 to 3,039,294
_2741
PfGW456L13_2742 - benABC operon transcriptional activator BenR, at 3,039,376 to 3,040,383
_2742
PfGW456L13_2743 - Na+ driven multidrug efflux pump, at 3,041,245 to 3,042,600
_2743
PfGW456L13_2744 - Phosphoribosyl transferase domain protein, at 3,042,837 to 3,043,508
_2744
PfGW456L13_2745 - Probable signal peptide protein, at 3,043,646 to 3,044,215
_2745
Group
Condition
PfGW456L13
_2741
PfGW456L13
_2742
PfGW456L13
_2743
PfGW456L13
_2744
PfGW456L13
_2745
carbon source
D-Fructose (C)
-0.6
-0.3
-0.3
+0.0
-0.1
carbon source
L-Tryptophan (C)
-1.4
-0.1
+0.0
-0.1
+0.3
carbon source
L-Arabinose (C)
-1.1
+0.2
+0.0
-0.1
-0.3
carbon source
a-Ketoglutaric (C)
-0.8
+0.0
-0.1
-0.5
+0.3
carbon source
D-Gluconic Acid (C)
-0.7
+0.0
-0.2
+0.1
-0.2
carbon source
D-Lactate (C)
-0.9
-0.1
+0.1
-0.1
+0.1
carbon source
Glycerol (C)
-0.6
+0.2
-0.2
-0.0
-0.2
carbon source
D,L-Lactate (C)
-0.6
-0.2
-0.2
+0.3
+0.2
stress
A22 0.04 mg/ml
+0.1
-0.3
-0.3
-0.3
+0.1
nitrogen source
Putrescine (N)
-0.5
-0.2
-0.1
-0.0
+0.4
carbon source
D-Alanine (C)
-0.4
-0.3
+0.1
+0.1
+0.4
carbon source
L-Lactate (C)
-0.2
+0.4
-0.5
-0.0
+0.1
carbon source
Putrescine (C)
-0.5
-0.1
-0.2
+0.3
+0.5
stress
D-Cycloserine 0.125 mg/ml
-0.1
-0.1
-0.1
-0.2
+0.5
carbon source
L-Histidine (C)
-0.0
-0.6
+0.7
+0.1
-0.1
stress
Lomefloxacin 0.0004 mM
+0.1
+0.2
-0.6
-0.0
+0.4
carbon source
Trisodium citrate (C)
-0.3
+0.2
+0.4
-0.0
-0.2
nitrogen source
D-Serine (N)
-0.4
+0.3
+0.3
+0.2
+0.1
carbon source
octanoate (C)
+0.3
+0.4
-0.8
-0.1
+0.7
carbon source
D-Glucosamine Hydrochloride (C)
+0.2
-0.1
+0.4
-0.2
+0.2
carbon source
L-Malic (C)
-0.0
+0.3
+0.3
-0.5
+0.5
nitrogen source
L-Serine (N)
-0.3
+0.2
+0.2
+0.2
+0.3
carbon source
D-Alanine (C)
+0.3
+0.2
-0.2
+0.1
+0.3
carbon source
D-Mannose (C)
+0.2
-0.3
+0.4
+0.0
+0.3
carbon source
D-Lactate (C)
+0.0
-0.4
+0.7
-0.1
+0.5
carbon source
D-Glucose (C)
+0.4
-0.0
+0.5
-0.1
+0.1
stress
Fusidic 0.08 mg/ml
+0.8
+0.2
-0.1
-0.0
+0.0
carbon source
L-Arabinose (C)
+0.4
-0.1
+0.3
+0.1
+0.3
carbon source
D-Glucosamine Hydrochloride (C)
+0.4
+0.2
+0.4
-0.0
+0.2
carbon source
D-Galactose (C)
+0.2
-0.3
+0.6
+0.2
+0.5
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