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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2713 and PfGW456L13_2714 are separated by 7 nucleotides
PfGW456L13_2714 and PfGW456L13_2715 are separated by 245 nucleotides
PfGW456L13_2715 and PfGW456L13_2716 are separated by 61 nucleotides
PfGW456L13_2716 and PfGW456L13_2717 are separated by 22 nucleotides
PfGW456L13_2713 - Aldehyde dehydrogenase (EC 1.2.1.3), at 3,010,178 to 3,011,569
_2713
PfGW456L13_2714 - glutamine synthetase family protein, at 3,011,577 to 3,012,950
_2714
PfGW456L13_2715 - Adenylate cyclase (EC 4.6.1.1), at 3,013,196 to 3,014,794
_2715
PfGW456L13_2716 - Putative secreted protein, at 3,014,856 to 3,015,797
_2716
PfGW456L13_2717 - hypothetical protein, at 3,015,820 to 3,015,951
_2717
Group
Condition
PfGW456L13
_2713
PfGW456L13
_2714
PfGW456L13
_2715
PfGW456L13
_2716
PfGW456L13
_2717
stress
Lomefloxacin 0.0004 mM
-0.7
-0.7
+0.1
-0.6
-0.3
carbon source
succinate (C)
-0.0
-0.2
-0.3
-0.4
-1.0
carbon source
Glycerol (C)
+0.3
+0.1
-0.2
+0.1
-1.7
carbon source
L-Glutamine (C)
-0.2
-0.1
+0.0
+0.1
-1.1
nitrogen source
L-Isoleucine (N)
+0.1
+0.1
+0.1
-0.2
-1.2
carbon source
D-Galactose (C)
-0.1
+0.1
-0.0
+0.1
-1.1
carbon source
D-Gluconic Acid (C)
+0.1
+0.0
-0.2
-0.3
-0.6
carbon source
D-Lactate (C)
-0.1
+0.1
-0.1
+0.1
-0.8
carbon source
D-Serine (C)
+0.2
-0.3
-0.1
+0.0
-0.7
stress
A22 0.04 mg/ml
+0.1
+0.0
-0.1
+0.1
-0.8
carbon source
D-Galactose (C)
-0.4
+0.3
-0.1
-0.1
-0.2
carbon source
a-Ketoglutaric (C)
-0.1
+0.0
+0.4
+0.2
-0.9
stress
Nickel (II) chloride 1 mM
+0.1
-0.0
-0.2
+0.2
-0.5
nitrogen source
L-Glutamic (N)
+0.2
-0.1
+0.2
-0.1
-0.5
carbon source
D-Glucosamine Hydrochloride (C)
+0.4
+0.2
+0.0
+0.1
-0.9
carbon source
D-Alanine (C)
+0.3
-0.1
+0.0
+0.1
-0.5
stress
Vancomycin 0.125 mg/ml
+0.2
-0.0
+0.1
+0.2
-0.6
carbon source
L-Malic (C)
-0.1
+0.1
+0.3
+0.1
-0.5
carbon source
L-Arabinose (C)
+0.2
-0.0
+0.1
+0.1
-0.7
carbon source
L-Lactate (C)
+0.2
+0.1
-0.1
+0.3
-0.5
carbon source
Putrescine (C)
+0.1
+0.3
-0.3
+0.2
-0.4
carbon source
L-Phenylalanine (C)
+0.3
-0.0
-0.0
+0.3
-0.5
carbon source
Trisodium citrate (C)
+0.2
+0.1
+0.2
+0.1
-0.5
carbon source
L-Arabinose (C)
-0.0
-0.2
-0.1
-0.2
+0.6
carbon source
D-Gluconic Acid (C)
+0.5
+0.1
-0.3
+0.2
-0.2
carbon source
D,L-Lactate (C)
+0.5
-0.1
-0.4
-0.0
+0.5
carbon source
D-Glucose (C)
+0.2
+0.3
-0.2
+0.3
+0.1
carbon source
octanoate (C)
+0.4
+0.3
+0.4
+0.4
-0.6
nitrogen source
L-Citrulline (N)
+0.2
+0.4
+0.3
+0.2
-0.2
carbon source
D-Fructose (C)
+0.1
+0.3
+0.1
+0.4
+0.2
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