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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2710 and PfGW456L13_2711 are separated by 319 nucleotides
PfGW456L13_2711 and PfGW456L13_2712 are separated by 162 nucleotides
PfGW456L13_2712 and PfGW456L13_2713 are separated by 3 nucleotides
PfGW456L13_2713 and PfGW456L13_2714 are separated by 7 nucleotides
PfGW456L13_2710 - hypothetical protein, at 3,006,688 to 3,006,978
_2710
PfGW456L13_2711 - cell processes; transport of small molecules; amino acids, amines, peptides, at 3,007,298 to 3,008,851
_2711
PfGW456L13_2712 - Alcohol dehydrogenase (EC 1.1.1.1), at 3,009,014 to 3,010,174
_2712
PfGW456L13_2713 - Aldehyde dehydrogenase (EC 1.2.1.3), at 3,010,178 to 3,011,569
_2713
PfGW456L13_2714 - glutamine synthetase family protein, at 3,011,577 to 3,012,950
_2714
Group
Condition
PfGW456L13
_2710
PfGW456L13
_2711
PfGW456L13
_2712
PfGW456L13
_2713
PfGW456L13
_2714
lb
LB
-0.9
-0.2
-0.3
-0.1
-0.1
carbon source
L-Malic (C)
-0.8
+0.1
-0.6
-0.1
+0.1
carbon source
D-Galactose (C)
-0.6
-0.0
-0.4
-0.1
+0.1
carbon source
Trisodium citrate (C)
-0.2
-0.3
-0.9
+0.2
+0.1
carbon source
D-Lactate (C)
-0.4
+0.1
-0.5
+0.1
-0.1
carbon source
a-Ketoglutaric (C)
-0.3
-0.3
+0.3
-0.1
-0.4
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.3
-0.1
-0.3
-0.2
-0.1
carbon source
D-Serine (C)
-0.3
-0.1
+0.1
+0.2
-0.3
carbon source
D-Galactose (C)
-0.2
+0.2
-0.4
-0.4
+0.3
carbon source
D,L-Lactate (C)
-0.3
-0.0
-0.5
+0.5
-0.1
carbon source
L-Tryptophan (C)
+0.1
+0.2
-0.4
-0.3
+0.1
carbon source
L-Glutamine (C)
-0.2
-0.3
+0.5
-0.2
-0.1
stress
Lomefloxacin 0.0004 mM
+0.2
+0.2
+0.7
-0.7
-0.7
carbon source
D-Gluconic Acid (C)
-0.7
+0.1
-0.2
+0.5
+0.1
nitrogen source
L-Threonine (N)
-0.4
+0.2
-0.2
+0.1
+0.3
carbon source
D-Fructose (C)
+0.1
-0.3
-0.3
+0.1
+0.3
carbon source
D-Fructose (C)
+0.1
-0.0
-0.6
+0.5
+0.1
carbon source
Glycerol (C)
-0.0
+0.2
-0.5
+0.2
+0.3
stress
Dimethyl Sulfoxide 7.5 vol%
+0.3
+0.1
-0.4
+0.2
+0.1
carbon source
octanoate (C)
-0.2
-0.1
-0.1
+0.4
+0.3
carbon source
a-Ketoglutaric (C)
-0.2
+0.1
+0.6
-0.1
+0.0
stress
Vancomycin 0.25 mg/ml
-0.2
-0.0
+0.4
+0.4
-0.2
carbon source
L-Histidine (C)
-0.2
+0.3
-0.1
+0.2
+0.2
carbon source
L-Alanine (C)
-0.3
+0.2
+0.1
+0.3
+0.0
nitrogen source
L-Citrulline (N)
+0.3
-0.1
-0.2
+0.2
+0.4
carbon source
Glycerol (C)
-0.2
-0.0
+0.4
+0.3
+0.1
carbon source
L-Lactate (C)
-0.2
-0.1
+0.6
+0.2
+0.1
carbon source
Putrescine (C)
-0.5
+0.3
+0.3
+0.1
+0.3
nitrogen source
L-Glutamine (N)
-0.1
-0.1
+0.3
+0.4
+0.1
carbon source
D-Glucose (C)
+0.1
+0.1
+0.2
+0.2
+0.3
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