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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2688 and PfGW456L13_2689 are separated by 151 nucleotides
PfGW456L13_2689 and PfGW456L13_2690 are separated by 53 nucleotides
PfGW456L13_2690 and PfGW456L13_2691 are separated by 283 nucleotides
PfGW456L13_2691 and PfGW456L13_2692 are separated by 2 nucleotides
PfGW456L13_2688 - Transcriptional regulator, LysR family, at 2,987,699 to 2,988,613
_2688
PfGW456L13_2689 - Agmatinase (EC 3.5.3.11), at 2,988,765 to 2,989,766
_2689
PfGW456L13_2690 - Aldehyde dehydrogenase (EC 1.2.1.3), at 2,989,820 to 2,991,328
_2690
PfGW456L13_2691 - Cytosine/purine/uracil/thiamine/allantoin permease family protein, at 2,991,612 to 2,993,186
_2691
PfGW456L13_2692 - Choline dehydrogenase (EC 1.1.99.1), at 2,993,189 to 2,994,892
_2692
Group
Condition
PfGW456L13
_2688
PfGW456L13
_2689
PfGW456L13
_2690
PfGW456L13
_2691
PfGW456L13
_2692
stress
Lomefloxacin 0.0004 mM
-0.0
-0.6
-0.3
+0.2
-0.2
nitrogen source
L-Proline (N)
-0.1
-0.4
-0.0
-0.1
-0.1
control
LB
-0.2
-0.2
+0.1
-0.1
-0.1
carbon source
D-Fructose (C)
-0.4
-0.1
+0.2
-0.1
-0.0
carbon source
Putrescine (C)
-0.0
-0.2
+0.1
-0.3
+0.1
carbon source
L-Lactate (C)
-0.6
+0.1
+0.1
+0.2
-0.2
carbon source
D,L-Lactate (C)
-0.1
-0.3
+0.2
+0.1
-0.1
carbon source
D-Lactate (C)
-0.1
-0.1
-0.2
+0.3
-0.1
carbon source
a-Ketoglutaric (C)
+0.3
-0.2
-0.2
+0.0
-0.1
carbon source
Trisodium citrate (C)
+0.1
-0.3
+0.1
-0.1
+0.1
carbon source
D-Glucose (C)
-0.3
-0.2
+0.1
+0.1
+0.1
stress
Dimethyl Sulfoxide 7.5 vol%
+0.2
-0.2
+0.1
+0.0
-0.2
stress
Bacitracin 0.5 mg/ml
+0.1
-0.1
-0.2
+0.2
+0.1
carbon source
D-Gluconic Acid (C)
+0.4
+0.2
-0.3
+0.0
-0.1
stress
Aluminum chloride 5 mM
-0.1
+0.1
-0.1
+0.1
+0.2
carbon source
D-Lactate (C)
+0.1
-0.1
+0.2
-0.2
+0.2
carbon source
L-Malic (C)
+0.2
-0.2
+0.1
+0.1
+0.0
carbon source
D-Galactose (C)
-0.1
+0.0
+0.4
-0.0
-0.1
carbon source
octanoate (C)
+0.3
-0.3
-0.0
+0.1
+0.4
stress
Nickel (II) chloride 1 mM
-0.2
+0.3
+0.2
-0.0
+0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.2
+0.1
-0.1
+0.0
+0.3
carbon source
L-Phenylalanine (C)
+0.0
-0.1
+0.1
+0.2
+0.2
carbon source
D-Glucosamine Hydrochloride (C)
+0.1
+0.2
-0.1
+0.2
+0.1
carbon source
L-Arabinose (C)
-0.1
+0.3
+0.2
-0.0
+0.3
carbon source
a-Ketoglutaric (C)
-0.1
+0.0
+0.3
+0.2
+0.3
carbon source
Glycerol (C)
+0.3
-0.0
+0.3
-0.0
+0.1
stress
Cobalt chloride 0.16 mM
-0.0
+0.3
+0.2
+0.0
+0.2
carbon source
L-Tryptophan (C)
+0.2
+0.2
+0.2
+0.1
+0.0
carbon source
Glycerol (C)
+0.2
+0.4
+0.0
-0.1
+0.2
carbon source
L-Malic (C)
+0.4
+0.1
+0.2
+0.1
+0.1
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