Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_2684 and PfGW456L13_2685 are separated by 167 nucleotidesPfGW456L13_2685 and PfGW456L13_2686 are separated by 41 nucleotidesPfGW456L13_2686 and PfGW456L13_2687 are separated by 404 nucleotidesPfGW456L13_2687 and PfGW456L13_2688 are separated by 68 nucleotides PfGW456L13_2684 - Lipoate synthase, at 2,982,879 to 2,983,868 _2684 PfGW456L13_2685 - Glycine hydroxymethyltransferase (EC 2.1.2.1) (from data), at 2,984,036 to 2,985,292 _2685 PfGW456L13_2686 - Glycine cleavage system H protein, at 2,985,334 to 2,985,717 _2686 PfGW456L13_2687 - transcriptional regulator, MerR family, at 2,986,122 to 2,987,630 _2687 PfGW456L13_2688 - Transcriptional regulator, LysR family, at 2,987,699 to 2,988,613 _2688
Group Condition PfGW456L13_2684 PfGW456L13_2685 PfGW456L13_2686 PfGW456L13_2687 PfGW456L13_2688
control LB control -0.6 -0.3 -1.0 -0.2 -0.2
carbon source L-Glutamine (C) -0.3 -0.1 -1.1 -0.3 +0.0
carbon source D-Alanine (C) -0.2 -0.0 -0.4 -0.6 -0.2
carbon source Trisodium citrate (C) -0.6 +0.0 -0.5 -0.3 +0.1
stress Aluminum chloride 2.5 mM -0.3 -0.1 -0.8 -0.1 -0.0
nitrogen source Glycine (N) +0.2 -1.4 +0.2 -0.3 -0.1
carbon source L-Arabinose (C) -0.4 -0.3 -0.2 -0.5 +0.2
carbon source L-Asparagine (C) -0.4 -0.2 -0.3 -0.2 -0.0
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x -0.5 -0.2 -0.3 -0.3 +0.2
carbon source Putrescine (C) -0.3 -0.3 +0.2 -0.6 -0.0
control LB control -0.3 +0.1 -0.5 -0.3 -0.1
carbon source D-Lactate (C) -0.3 -0.1 -0.7 +0.2 +0.1
carbon source D-Lactate (C) -0.5 -0.0 +0.6 -0.6 -0.1
nitrogen source Cytosine (N) +0.2 -0.1 -0.6 -0.2 +0.2
carbon source L-Glutamine (C) +0.2 +0.1 -0.8 -0.2 +0.1
carbon source D-Glucose (C) +0.0 +0.1 +0.5 -0.6 -0.3
carbon source octanoate (C) -0.2 -0.8 +0.8 -0.4 +0.3
control LB control -0.2 +0.2 -0.3 +0.3 -0.2
carbon source a-Ketoglutaric (C) -0.7 -0.2 +0.6 -0.0 +0.3
carbon source D-Serine (C) -0.5 +0.0 +0.6 -0.0 -0.1
nitrogen source Gly-DL-Asp (N) +0.3 +0.2 -0.5 +0.1 +0.2
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x -0.4 -0.1 +0.8 -0.0 +0.0
carbon source L-Tryptophan (C) -0.3 -0.2 +0.7 +0.1 +0.2
carbon source L-Lactate (C) +0.2 +0.1 +0.8 -0.1 -0.6
control LB -0.3 +0.3 +0.5 +0.1 -0.1
carbon source Glycerol (C) -0.2 -0.2 +0.7 +0.1 +0.2
stress Vancomycin 0.5 mg/ml -0.2 -0.1 +0.7 +0.1 +0.1
carbon source L-Tryptophan (C) +0.1 -0.1 +0.7 -0.1 +0.2
carbon source Glycerol (C) +0.8 -0.0 +0.3 +0.1 +0.3
carbon source D-Glucosamine Hydrochloride (C) +0.7 +0.2 +0.5 +0.3 +0.0
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