Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_2679 and PfGW456L13_2680 are separated by 107 nucleotidesPfGW456L13_2680 and PfGW456L13_2681 are separated by 45 nucleotidesPfGW456L13_2681 and PfGW456L13_2682 are separated by 145 nucleotidesPfGW456L13_2682 and PfGW456L13_2683 overlap by 4 nucleotides PfGW456L13_2679 - Exoenzymes regulatory protein AepA in lipid-linked oligosaccharide synthesis cluster, at 2,977,204 to 2,978,943 _2679 PfGW456L13_2680 - Probable signal peptide protein, at 2,979,051 to 2,979,791 _2680 PfGW456L13_2681 - Cytosine/purine/uracil/thiamine/allantoin permease family protein, at 2,979,837 to 2,981,225 _2681 PfGW456L13_2682 - Gll0911 protein, at 2,981,371 to 2,982,090 _2682 PfGW456L13_2683 - D-alanyl-D-alanine dipeptidase (EC 3.4.13.22), at 2,982,087 to 2,982,845 _2683
Group Condition PfGW456L13_2679 PfGW456L13_2680 PfGW456L13_2681 PfGW456L13_2682 PfGW456L13_2683
carbon source L-Glutamine (C) -0.2 -0.2 -0.4 -0.9 -0.4
carbon source octanoate (C) +0.0 -0.6 -0.2 -0.7 -0.2
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x -0.1 -0.0 -0.1 -1.0 -0.4
carbon source Putrescine (C) +0.0 -0.3 +0.2 -1.2 -0.0
carbon source Trisodium citrate (C) -0.0 -0.0 -0.3 -0.3 -0.6
stress Vancomycin 0.5 mg/ml -0.2 -0.3 -0.2 -0.7 +0.1
control LB control -0.0 +0.0 -0.2 -0.8 -0.0
control LB control -0.2 +0.1 +0.0 -0.6 -0.2
stress Vancomycin 0.25 mg/ml +0.1 +0.1 +0.1 -0.9 -0.1
carbon source D-Gluconic Acid (C) -0.3 +0.2 +0.0 -0.5 +0.1
carbon source L-Arabinose (C) +0.2 +0.0 -0.2 -0.5 +0.1
nitrogen source Gly-Glu (N) +0.4 -0.0 -0.1 -0.5 -0.1
stress Cephalothin 3 mg/ml +0.4 -0.0 -0.1 -0.6 +0.1
carbon source L-Lactate (C) +0.4 +0.0 +0.5 -0.8 -0.2
carbon source D-Serine (C) -0.5 +0.1 +0.0 +0.3 +0.2
nitrogen source L-Glutamine (N) +0.2 +0.2 -0.0 -0.5 +0.1
carbon source L-Phenylalanine (C) -0.1 -0.0 -0.2 +0.6 -0.2
carbon source L-Valine (C) +0.5 +0.0 +0.1 -0.2 -0.3
carbon source L-Malic (C) -0.6 +0.2 -0.1 +0.6 +0.1
carbon source L-Valine (C) -0.1 +0.2 -0.3 +0.4 +0.1
carbon source D,L-Lactate (C) -0.1 +0.1 +0.3 +0.4 -0.3
carbon source D-Galactose (C) +0.1 -0.1 -0.1 +1.0 -0.4
stress Aluminum chloride 5 mM -0.1 +0.1 +0.2 +0.7 -0.4
carbon source L-Malic (C) +0.4 -0.1 +0.1 +0.3 -0.1
carbon source D-Galactose (C) +0.5 -0.0 -0.3 +0.3 +0.2
carbon source D-Gluconic Acid (C) +0.2 -0.1 +0.1 +0.5 +0.1
carbon source a-Ketoglutaric (C) +0.4 +0.1 -0.2 +0.5 +0.1
nitrogen source L-Threonine (N) +0.2 +0.2 +0.2 +0.5 -0.0
carbon source L-Histidine (C) +0.1 +0.3 +0.1 +0.4 +0.3
nitrogen source L-Phenylalanine (N) +0.3 +0.2 -0.0 +0.7 +0.0
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