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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2679 and PfGW456L13_2680 are separated by 107 nucleotides
PfGW456L13_2680 and PfGW456L13_2681 are separated by 45 nucleotides
PfGW456L13_2681 and PfGW456L13_2682 are separated by 145 nucleotides
PfGW456L13_2682 and PfGW456L13_2683 overlap by 4 nucleotides
PfGW456L13_2679 - Exoenzymes regulatory protein AepA in lipid-linked oligosaccharide synthesis cluster, at 2,977,204 to 2,978,943
_2679
PfGW456L13_2680 - Probable signal peptide protein, at 2,979,051 to 2,979,791
_2680
PfGW456L13_2681 - Cytosine/purine/uracil/thiamine/allantoin permease family protein, at 2,979,837 to 2,981,225
_2681
PfGW456L13_2682 - Gll0911 protein, at 2,981,371 to 2,982,090
_2682
PfGW456L13_2683 - D-alanyl-D-alanine dipeptidase (EC 3.4.13.22), at 2,982,087 to 2,982,845
_2683
Group
Condition
PfGW456L13
_2679
PfGW456L13
_2680
PfGW456L13
_2681
PfGW456L13
_2682
PfGW456L13
_2683
carbon source
L-Glutamine (C)
-0.2
-0.2
-0.4
-0.9
-0.4
carbon source
octanoate (C)
+0.0
-0.6
-0.2
-0.7
-0.2
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.1
-0.0
-0.1
-1.0
-0.4
carbon source
Putrescine (C)
+0.0
-0.3
+0.2
-1.2
-0.0
carbon source
Trisodium citrate (C)
-0.0
-0.0
-0.3
-0.3
-0.6
stress
Vancomycin 0.5 mg/ml
-0.2
-0.3
-0.2
-0.7
+0.1
control
LB control
-0.0
+0.0
-0.2
-0.8
-0.0
control
LB control
-0.2
+0.1
+0.0
-0.6
-0.2
stress
Vancomycin 0.25 mg/ml
+0.1
+0.1
+0.1
-0.9
-0.1
carbon source
D-Gluconic Acid (C)
-0.3
+0.2
+0.0
-0.5
+0.1
carbon source
L-Arabinose (C)
+0.2
+0.0
-0.2
-0.5
+0.1
nitrogen source
Gly-Glu (N)
+0.4
-0.0
-0.1
-0.5
-0.1
stress
Cephalothin 3 mg/ml
+0.4
-0.0
-0.1
-0.6
+0.1
carbon source
L-Lactate (C)
+0.4
+0.0
+0.5
-0.8
-0.2
carbon source
D-Serine (C)
-0.5
+0.1
+0.0
+0.3
+0.2
nitrogen source
L-Glutamine (N)
+0.2
+0.2
-0.0
-0.5
+0.1
carbon source
L-Phenylalanine (C)
-0.1
-0.0
-0.2
+0.6
-0.2
carbon source
L-Valine (C)
+0.5
+0.0
+0.1
-0.2
-0.3
carbon source
L-Malic (C)
-0.6
+0.2
-0.1
+0.6
+0.1
carbon source
L-Valine (C)
-0.1
+0.2
-0.3
+0.4
+0.1
carbon source
D,L-Lactate (C)
-0.1
+0.1
+0.3
+0.4
-0.3
carbon source
D-Galactose (C)
+0.1
-0.1
-0.1
+1.0
-0.4
stress
Aluminum chloride 5 mM
-0.1
+0.1
+0.2
+0.7
-0.4
carbon source
L-Malic (C)
+0.4
-0.1
+0.1
+0.3
-0.1
carbon source
D-Galactose (C)
+0.5
-0.0
-0.3
+0.3
+0.2
carbon source
D-Gluconic Acid (C)
+0.2
-0.1
+0.1
+0.5
+0.1
carbon source
a-Ketoglutaric (C)
+0.4
+0.1
-0.2
+0.5
+0.1
nitrogen source
L-Threonine (N)
+0.2
+0.2
+0.2
+0.5
-0.0
carbon source
L-Histidine (C)
+0.1
+0.3
+0.1
+0.4
+0.3
nitrogen source
L-Phenylalanine (N)
+0.3
+0.2
-0.0
+0.7
+0.0
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