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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2661 and PfGW456L13_2662 are separated by 1 nucleotides
PfGW456L13_2662 and PfGW456L13_2663 are separated by 170 nucleotides
PfGW456L13_2663 and PfGW456L13_2664 are separated by 25 nucleotides
PfGW456L13_2664 and PfGW456L13_2665 are separated by 19 nucleotides
PfGW456L13_2661 - tRNA 5-methylaminomethyl-2-thiouridine synthase TusC, at 2,962,674 to 2,963,036
_2661
PfGW456L13_2662 - tRNA 5-methylaminomethyl-2-thiouridine synthase TusD, at 2,963,038 to 2,963,460
_2662
PfGW456L13_2663 - Membrane protein, putative, at 2,963,631 to 2,964,335
_2663
PfGW456L13_2664 - FIG00957702: hypothetical protein, at 2,964,361 to 2,964,690
_2664
PfGW456L13_2665 - hypothetical protein, at 2,964,710 to 2,964,958
_2665
Group
Condition
PfGW456L13
_2661
PfGW456L13
_2662
PfGW456L13
_2663
PfGW456L13
_2664
PfGW456L13
_2665
carbon source
D-Galactose (C)
N.D.
N.D.
+0.1
-1.8
-0.3
stress
Lomefloxacin 0.0004 mM
N.D.
N.D.
+0.2
-1.1
-0.4
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
N.D.
N.D.
+0.0
-0.9
-0.2
nitrogen source
L-Leucine (N)
N.D.
N.D.
-0.2
-0.5
-0.2
stress
sodium fluoride 12.5 mM
N.D.
N.D.
-0.1
-0.6
-0.3
nitrogen source
NAG (N)
N.D.
N.D.
+0.0
-0.5
-0.5
nitrogen source
D-Alanine (N)
N.D.
N.D.
+0.0
-0.8
+0.1
carbon source
Putrescine (C)
N.D.
N.D.
+0.1
-0.5
-0.2
nitrogen source
nitrate (N)
N.D.
N.D.
+0.1
-0.5
-0.2
carbon source
Trisodium citrate (C)
N.D.
N.D.
-0.2
+0.3
-0.7
nitrogen source
L-Threonine (N)
N.D.
N.D.
-0.2
+0.3
-0.5
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
-0.3
-0.6
+0.5
carbon source
D-Fructose (C)
N.D.
N.D.
+0.4
-0.4
-0.4
stress
Dimethyl Sulfoxide 7.5 vol%
N.D.
N.D.
+0.2
-0.6
+0.1
carbon source
L-Tryptophan (C)
N.D.
N.D.
+0.3
-0.5
-0.1
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
-0.2
+0.4
-0.5
carbon source
L-Malic (C)
N.D.
N.D.
-0.0
-0.5
+0.4
nitrogen source
Ammonium chloride (N)
N.D.
N.D.
+0.3
-0.4
+0.1
carbon source
L-Tryptophan (C)
N.D.
N.D.
+0.1
+0.4
-0.5
stress
Vancomycin 0.25 mg/ml
N.D.
N.D.
+0.2
-0.6
+0.6
carbon source
L-Malic (C)
N.D.
N.D.
-0.0
-0.1
+0.7
carbon source
L-Glutamine (C)
N.D.
N.D.
+0.6
-0.1
+0.3
carbon source
D-Alanine (C)
N.D.
N.D.
+0.4
+0.4
-0.1
carbon source
D-Serine (C)
N.D.
N.D.
+0.1
+0.4
+0.4
carbon source
D-Lactate (C)
N.D.
N.D.
+0.1
+0.8
-0.1
stress
Vancomycin 0.125 mg/ml
N.D.
N.D.
+0.5
-0.1
+0.5
carbon source
D-Glucosamine Hydrochloride (C)
N.D.
N.D.
+0.5
+0.7
-0.2
carbon source
D-Lactate (C)
N.D.
N.D.
+0.3
+0.4
+0.3
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
+0.4
+0.3
+0.3
carbon source
L-Alanine (C)
N.D.
N.D.
+0.3
+0.4
+0.4
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