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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_264 and PfGW456L13_265 are separated by 3 nucleotides
PfGW456L13_265 and PfGW456L13_266 are separated by 4 nucleotides
PfGW456L13_266 and PfGW456L13_267 are separated by 8 nucleotides
PfGW456L13_267 and PfGW456L13_268 are separated by 4 nucleotides
PfGW456L13_264 - General secretion pathway protein F, at 306,090 to 307,295
_264
PfGW456L13_265 - General secretion pathway protein E, at 307,299 to 308,771
_265
PfGW456L13_266 - General secretion pathway protein D, at 308,776 to 310,695
_266
PfGW456L13_267 - hypothetical protein, at 310,704 to 311,246
_267
PfGW456L13_268 - Cytochrome B561, at 311,251 to 311,814
_268
Group
Condition
PfGW456L13
_264
PfGW456L13
_265
PfGW456L13
_266
PfGW456L13
_267
PfGW456L13
_268
carbon source
succinate (C)
-0.1
+0.4
+0.0
-1.2
-0.5
carbon source
L-Histidine (C)
-0.8
+0.1
+0.1
-0.4
+0.0
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.8
-0.0
+0.1
-0.1
-0.0
carbon source
D-Glucose (C)
-1.1
-0.0
+0.1
+0.4
-0.1
carbon source
D-Fructose (C)
-0.3
+0.4
-0.1
-0.7
+0.2
carbon source
D,L-Lactate (C)
+0.2
+0.2
-0.2
-0.3
-0.3
carbon source
octanoate (C)
-0.6
+0.2
+0.2
+0.1
-0.2
nitrogen source
Putrescine (N)
-0.7
+0.1
-0.0
+0.3
+0.0
carbon source
Putrescine (C)
-0.5
+0.4
-0.3
+0.2
+0.0
carbon source
D-Gluconic Acid (C)
+0.0
+0.4
+0.1
-0.7
+0.1
carbon source
D-Alanine (C)
+0.0
+0.3
+0.1
-0.8
+0.2
carbon source
L-Glutamine (C)
+0.5
+0.1
+0.2
-0.8
-0.0
carbon source
L-Tryptophan (C)
+0.1
+0.2
+0.2
-0.6
+0.2
carbon source
L-Alanine (C)
+0.5
+0.1
+0.2
-0.7
+0.0
carbon source
D-Gluconic Acid (C)
+0.9
+0.1
-0.3
-0.2
-0.3
stress
Thallium(I) acetate 0.002 mg/ml
+0.5
-0.2
-0.1
+0.3
-0.1
carbon source
D-Galactose (C)
-0.5
+0.5
+0.1
+0.3
+0.1
lb
LB
+0.5
+0.1
-0.2
+0.4
-0.1
carbon source
D-Lactate (C)
+0.8
+0.1
+0.1
-0.4
+0.1
stress
Fusidic 0.08 mg/ml
-0.2
-0.0
-0.1
+0.9
+0.1
carbon source
L-Lactate (C)
+0.3
-0.5
+0.1
+0.5
+0.4
stress
Bacitracin 1 mg/ml
+0.8
+0.2
-0.0
-0.4
+0.1
carbon source
D-Lactate (C)
+0.5
+0.2
+0.0
+0.4
-0.3
stress
Bacitracin 0.5 mg/ml
+0.3
-0.2
+0.2
+0.5
+0.1
stress
nitrite 5 mM
+0.5
+0.1
-0.0
+0.4
-0.1
stress
D-Cycloserine 0.125 mg/ml
+0.3
+0.2
+0.1
+0.6
-0.3
nitrogen source
L-Leucine (N)
+0.3
+0.1
-0.2
+0.6
+0.4
stress
Cephalothin 3 mg/ml
+0.6
+0.2
+0.1
+0.4
+0.1
stress
Vancomycin 0.125 mg/ml
+0.6
+0.2
+0.1
+0.6
+0.1
stress
Lomefloxacin 0.0004 mM
+1.0
+0.5
+0.2
+0.5
+0.4
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PfGW456L13_264
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PfGW456L13_266
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