Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_2645 and PfGW456L13_2646 are separated by 30 nucleotidesPfGW456L13_2646 and PfGW456L13_2647 are separated by 350 nucleotidesPfGW456L13_2647 and PfGW456L13_2648 are separated by 111 nucleotidesPfGW456L13_2648 and PfGW456L13_2649 are separated by 15 nucleotides PfGW456L13_2645 - ATP-dependent Clp protease adaptor protein ClpS, at 2,946,131 to 2,946,376 _2645 PfGW456L13_2646 - ATP-dependent Clp protease ATP-binding subunit ClpA, at 2,946,407 to 2,948,677 _2646 PfGW456L13_2647 - Translation initiation factor 1, at 2,949,028 to 2,949,246 _2647 PfGW456L13_2648 - Arginine-tRNA-protein transferase (EC 2.3.2.8), at 2,949,358 to 2,950,107 _2648 PfGW456L13_2649 - Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6), at 2,950,123 to 2,950,803 _2649
Group Condition PfGW456L13_2645 PfGW456L13_2646 PfGW456L13_2647 PfGW456L13_2648 PfGW456L13_2649
carbon source Trisodium citrate (C) +0.1 -1.9 N.D. -0.6 -2.3
stress D-Cycloserine 0.125 mg/ml -0.8 -1.9 N.D. -0.3 -0.4
carbon source D-Gluconic Acid (C) -0.2 -1.0 N.D. -0.2 -1.7
carbon source D-Fructose (C) -0.7 -1.7 N.D. -0.5 -0.1
nitrogen source L-Leucine (N) -0.9 -0.5 N.D. -0.8 -0.6
nitrogen source NAG (N) -0.9 -0.8 N.D. -0.6 -0.5
stress Vancomycin 0.5 mg/ml -0.2 -0.4 N.D. -0.9 -1.2
stress Chloride 400 mM -0.6 -0.8 N.D. -1.1 -0.3
carbon source D-Fructose (C) -1.1 -0.8 N.D. -0.6 -0.3
carbon source D-Lactate (C) +0.3 -0.8 N.D. -0.5 -1.4
nitrogen source Cytosine (N) -0.8 -0.6 N.D. -0.4 -0.6
nitrogen source L-Serine (N) -0.3 -0.5 N.D. -0.2 -1.2
nitrogen source D-Serine (N) -0.2 -0.7 N.D. -0.7 -0.7
nitrogen source Uridine (N) -0.6 -1.7 N.D. -0.3 +0.4
stress Vancomycin 0.25 mg/ml -0.3 -0.4 N.D. -0.8 -0.6
nitrogen source L-Lysine (N) -0.3 -0.6 N.D. -0.5 -0.7
carbon source Putrescine (C) -0.2 -1.0 N.D. -0.8 -0.1
carbon source L-Valine (C) -0.4 -0.9 N.D. -0.9 +0.1
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x -0.5 -0.6 N.D. -0.6 -0.5
stress Vancomycin 0.125 mg/ml -0.7 -0.5 N.D. -0.4 -0.5
nitrogen source nitrate (N) -0.5 -0.9 N.D. -0.5 -0.2
carbon source D-Galactose (C) -0.6 -1.0 N.D. -0.5 +0.2
carbon source D-Galactose (C) -0.2 -0.8 N.D. -0.2 -0.6
nitrogen source Glycine (N) -0.0 -0.6 N.D. -0.4 -0.9
carbon source L-Valine (C) -0.3 -0.8 N.D. -0.8 +0.2
carbon source L-Lactate (C) -0.7 -0.4 N.D. -0.7 +0.3
carbon source D-Gluconic Acid (C) -0.5 -1.0 N.D. -0.2 +0.3
carbon source L-Tryptophan (C) -0.1 -0.7 N.D. -0.5 +0.7
carbon source D-Lactate (C) -0.0 -0.8 N.D. -0.3 +1.1
carbon source octanoate (C) +1.7 +2.1 N.D. -0.8 +0.6
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PfGW456L13_2645
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PfGW456L13_2646
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PfGW456L13_2648
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PfGW456L13_2649
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