Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_2637 and PfGW456L13_2638 are separated by 124 nucleotidesPfGW456L13_2638 and PfGW456L13_2639 overlap by 4 nucleotidesPfGW456L13_2639 and PfGW456L13_2640 are separated by 59 nucleotidesPfGW456L13_2640 and PfGW456L13_2641 are separated by 215 nucleotides PfGW456L13_2637 - Adenylosuccinate lyase (EC 4.3.2.2), at 2,937,476 to 2,938,846 _2637 PfGW456L13_2638 - FIG002903: a protein of unknown function perhaps involved in purine metabolism, at 2,938,971 to 2,939,594 _2638 PfGW456L13_2639 - tRNA-specific 2-thiouridylase MnmA, at 2,939,591 to 2,940,724 _2639 PfGW456L13_2640 - Nudix-like NDP and NTP phosphohydrolase YmfB, at 2,940,784 to 2,941,230 _2640 PfGW456L13_2641 - Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42), at 2,941,446 to 2,943,671 _2641
Group Condition PfGW456L13_2637 PfGW456L13_2638 PfGW456L13_2639 PfGW456L13_2640 PfGW456L13_2641
carbon source D-Gluconic Acid (C) N.D. -0.7 N.D. -1.3 N.D.
carbon source D,L-Lactate (C) N.D. -0.2 N.D. -0.6 N.D.
nitrogen source L-Proline (N) N.D. -0.7 N.D. +0.1 N.D.
carbon source D-Alanine (C) N.D. -0.6 N.D. +0.1 N.D.
stress Lomefloxacin 0.0004 mM N.D. +0.2 N.D. -0.5 N.D.
carbon source L-Histidine (C) N.D. +0.3 N.D. -0.6 N.D.
carbon source L-Malic (C) N.D. -0.4 N.D. +0.3 N.D.
nitrogen source Cytosine (N) N.D. +0.3 N.D. -0.5 N.D.
nitrogen source nitrate (N) N.D. -0.4 N.D. +0.3 N.D.
carbon source D-Glucosamine Hydrochloride (C) N.D. +0.5 N.D. -0.5 N.D.
carbon source L-Alanine (C) N.D. +0.4 N.D. -0.4 N.D.
carbon source D-Serine (C) N.D. +0.5 N.D. -0.4 N.D.
stress Paraquat dichloride 0.032 mg/ml N.D. +0.6 N.D. -0.1 N.D.
carbon source D-Mannose (C) N.D. +0.6 N.D. -0.1 N.D.
carbon source L-Glutamine (C) N.D. -0.1 N.D. +0.7 N.D.
carbon source L-Valine (C) N.D. +0.7 N.D. -0.1 N.D.
stress D-Cycloserine 0.125 mg/ml N.D. +0.1 N.D. +0.5 N.D.
carbon source L-Histidine (C) N.D. +0.5 N.D. +0.2 N.D.
carbon source D-Serine (C) N.D. +0.5 N.D. +0.2 N.D.
stress Bacitracin 1 mg/ml N.D. +0.6 N.D. +0.1 N.D.
stress Vancomycin 0.125 mg/ml N.D. +0.4 N.D. +0.4 N.D.
carbon source L-Lactate (C) N.D. +0.4 N.D. +0.4 N.D.
stress Aluminum chloride 5 mM N.D. +0.9 N.D. -0.0 N.D.
carbon source L-Phenylalanine (C) N.D. +0.6 N.D. +0.2 N.D.
stress Fusidic 0.03 mg/ml N.D. +0.4 N.D. +0.4 N.D.
stress Fusidic 0.08 mg/ml N.D. +0.5 N.D. +0.5 N.D.
stress Bacitracin 0.5 mg/ml N.D. +0.8 N.D. +0.2 N.D.
carbon source L-Tryptophan (C) N.D. +0.8 N.D. +0.4 N.D.
carbon source L-Tryptophan (C) N.D. +0.7 N.D. +0.5 N.D.
carbon source octanoate (C) N.D. +1.2 N.D. +0.4 N.D.
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PfGW456L13_2637
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PfGW456L13_2638
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