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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2569 and PfGW456L13_2570 are separated by 259 nucleotides
PfGW456L13_2570 and PfGW456L13_2571 are separated by 154 nucleotides
PfGW456L13_2571 and PfGW456L13_2572 are separated by 109 nucleotides
PfGW456L13_2572 and PfGW456L13_2573 are separated by 121 nucleotides
PfGW456L13_2569 - cytochrome b(561), at 2,854,920 to 2,855,480
_2569
PfGW456L13_2570 - Phosphonoacetaldehyde hydrolase (EC 3.11.1.1), at 2,855,740 to 2,856,567
_2570
PfGW456L13_2571 - 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37), at 2,856,722 to 2,857,831
_2571
PfGW456L13_2572 - Phosphonate uptake and metabolism regulator, LysR-family, at 2,857,941 to 2,858,804
_2572
PfGW456L13_2573 - transcriptional regulator, MerR family, at 2,858,926 to 2,859,798
_2573
Group
Condition
PfGW456L13
_2569
PfGW456L13
_2570
PfGW456L13
_2571
PfGW456L13
_2572
PfGW456L13
_2573
carbon source
D-Lactate (C)
+0.0
-0.5
-0.2
-1.3
-0.0
stress
Aluminum chloride 5 mM
-0.2
-0.6
-0.1
-0.1
-0.9
carbon source
D-Glucose (C)
-0.8
-0.2
-0.2
-0.5
+0.1
carbon source
L-Valine (C)
-0.0
-0.0
-0.2
-0.6
-0.5
carbon source
a-Ketoglutaric (C)
+0.1
-0.3
+0.4
-1.3
-0.1
stress
Aluminum chloride 2.5 mM
-0.3
-0.3
-0.2
-0.4
+0.0
carbon source
casaminos (C)
-0.1
+0.0
-0.1
-0.5
-0.5
carbon source
Glycerol (C)
-0.5
-0.0
+0.0
-0.4
-0.3
carbon source
D-Gluconic Acid (C)
+0.3
-0.2
-0.0
-0.3
-0.7
carbon source
a-Ketoglutaric (C)
+0.6
-0.2
-0.0
-0.2
-0.9
stress
Lomefloxacin 0.0004 mM
+0.6
-0.1
+0.0
+0.5
-1.6
carbon source
D-Galactose (C)
+0.1
+0.1
+0.0
-0.6
-0.2
stress
D-Cycloserine 0.125 mg/ml
+0.0
+0.2
+0.1
-0.5
-0.4
carbon source
Putrescine (C)
+0.6
-0.0
-0.0
-0.5
-0.6
carbon source
D,L-Lactate (C)
+0.1
-0.4
+0.1
+0.7
-0.9
stress
Fusidic 0.03 mg/ml
+0.4
+0.0
+0.2
-0.3
-0.6
nitrogen source
Gly-DL-Asp (N)
+0.4
-0.1
+0.2
+0.0
-0.8
carbon source
L-Tryptophan (C)
+0.3
-0.2
-0.2
+0.3
-0.0
carbon source
L-Arabinose (C)
+0.0
-0.5
-0.0
+0.8
+0.0
stress
Cephalothin 3 mg/ml
+0.5
+0.1
+0.2
+0.0
-0.4
nitrogen source
L-Citrulline (N)
+0.2
-0.2
-0.3
+0.3
+0.3
carbon source
succinate (C)
-0.6
+0.1
-0.1
+0.4
+0.4
carbon source
D-Fructose (C)
-0.2
+0.2
-0.3
+0.4
+0.5
stress
Vancomycin 0.5 mg/ml
+0.2
+0.2
+0.2
+0.3
-0.3
carbon source
D-Lactate (C)
+0.4
-0.2
-0.0
-0.2
+0.7
stress
Vancomycin 0.25 mg/ml
+0.1
+0.1
+0.0
+0.7
-0.3
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.4
+0.2
-0.1
+0.5
+0.1
carbon source
octanoate (C)
-0.2
+0.4
+0.2
+0.4
+0.6
stress
Vancomycin 0.125 mg/ml
+0.5
+0.3
+0.2
+0.6
-0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.2
+0.2
-0.0
+0.5
+0.6
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