Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_2523 and PfGW456L13_2524 are separated by 13 nucleotidesPfGW456L13_2524 and PfGW456L13_2525 overlap by 13 nucleotidesPfGW456L13_2525 and PfGW456L13_2526 are separated by 9 nucleotidesPfGW456L13_2526 and PfGW456L13_2527 are separated by 600 nucleotides PfGW456L13_2523 - Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-), at 2,790,011 to 2,791,093 _2523 PfGW456L13_2524 - Short-chain dehydrogenase/reductase SDR, at 2,791,107 to 2,791,862 _2524 PfGW456L13_2525 - Fumarate reductase flavoprotein subunit (EC 1.3.99.1), at 2,791,850 to 2,793,529 _2525 PfGW456L13_2526 - 4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-), at 2,793,539 to 2,794,054 _2526 PfGW456L13_2527 - hypothetical protein, at 2,794,655 to 2,795,257 _2527
Group Condition PfGW456L13_2523 PfGW456L13_2524 PfGW456L13_2525 PfGW456L13_2526 PfGW456L13_2527
carbon source D-Lactate (C) -2.0 -0.0 -0.4 -0.6 +0.5
stress Lomefloxacin 0.0004 mM -1.4 -0.1 +0.0 +0.3 -0.3
control LB control -0.3 -0.3 +0.0 -0.8 +0.0
stress Thallium(I) acetate 0.004 mg/ml -0.5 -0.2 -0.1 -0.2 -0.2
nitrogen source L-Proline (N) -1.4 +0.3 -0.0 +0.0 -0.1
nitrogen source Cytosine (N) -0.5 +0.3 +0.0 -0.4 -0.1
stress Nickel (II) chloride 1 mM -0.4 -0.1 -0.1 -0.4 +0.3
nitrogen source Glycine (N) -1.1 +0.3 +0.0 +0.1 +0.0
carbon source Glycerol (C) -0.9 -0.2 -0.1 +0.5 +0.2
carbon source D-Alanine (C) -0.3 +0.4 -0.2 -0.5 +0.0
nitrogen source L-Citrulline (N) -1.2 +0.5 +0.0 +0.2 +0.0
nitrogen source L-Glutamine (N) -0.8 +0.1 -0.0 +0.3 +0.1
carbon source L-Malic (C) +0.4 -0.4 +0.2 -0.7 +0.4
nitrogen source Gly-DL-Asp (N) -0.9 +0.2 +0.2 +0.8 -0.3
carbon source L-Glutamine (C) +0.4 +0.3 -0.1 -0.7 +0.2
carbon source D-Galactose (C) +0.7 -0.7 -0.1 -0.1 +0.3
carbon source a-Ketoglutaric (C) -0.2 +0.4 -0.2 -0.3 +0.4
carbon source Putrescine (C) -0.2 +0.5 -0.2 +0.4 -0.2
carbon source D,L-Lactate (C) -0.2 +0.3 -0.3 +0.6 -0.1
stress Vancomycin 0.25 mg/ml +0.5 +0.3 -0.1 -0.4 +0.1
carbon source succinate (C) +0.5 -0.2 -0.2 -0.0 +0.3
carbon source D-Gluconic Acid (C) -0.2 +0.6 -0.1 +0.2 +0.3
stress nitrate 200 mM -0.3 +0.4 +0.1 +0.6 +0.1
carbon source D-Glucose (C) +0.6 +0.2 +0.0 -0.2 +0.5
carbon source L-Alanine (C) +0.5 +0.5 +0.1 -0.1 +0.1
carbon source L-Arabinose (C) +0.9 +0.3 -0.2 +0.3 -0.1
carbon source L-Tryptophan (C) +0.5 +0.2 -0.0 +0.8 -0.0
carbon source Glycerol (C) +0.3 +0.8 +0.1 +0.5 +0.2
carbon source a-Ketoglutaric (C) +0.7 -0.1 -0.2 +0.6 +0.7
carbon source octanoate (C) +0.5 +0.1 +0.1 +0.6 +0.8
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