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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2523 and PfGW456L13_2524 are separated by 13 nucleotides
PfGW456L13_2524 and PfGW456L13_2525 overlap by 13 nucleotides
PfGW456L13_2525 and PfGW456L13_2526 are separated by 9 nucleotides
PfGW456L13_2526 and PfGW456L13_2527 are separated by 600 nucleotides
PfGW456L13_2523 - Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-), at 2,790,011 to 2,791,093
_2523
PfGW456L13_2524 - Short-chain dehydrogenase/reductase SDR, at 2,791,107 to 2,791,862
_2524
PfGW456L13_2525 - Fumarate reductase flavoprotein subunit (EC 1.3.99.1), at 2,791,850 to 2,793,529
_2525
PfGW456L13_2526 - 4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-), at 2,793,539 to 2,794,054
_2526
PfGW456L13_2527 - hypothetical protein, at 2,794,655 to 2,795,257
_2527
Group
Condition
PfGW456L13
_2523
PfGW456L13
_2524
PfGW456L13
_2525
PfGW456L13
_2526
PfGW456L13
_2527
carbon source
D-Lactate (C)
-2.0
-0.0
-0.4
-0.6
+0.5
stress
Lomefloxacin 0.0004 mM
-1.4
-0.1
+0.0
+0.3
-0.3
control
LB control
-0.3
-0.3
+0.0
-0.8
+0.0
stress
Thallium(I) acetate 0.004 mg/ml
-0.5
-0.2
-0.1
-0.2
-0.2
nitrogen source
L-Proline (N)
-1.4
+0.3
-0.0
+0.0
-0.1
nitrogen source
Cytosine (N)
-0.5
+0.3
+0.0
-0.4
-0.1
stress
Nickel (II) chloride 1 mM
-0.4
-0.1
-0.1
-0.4
+0.3
nitrogen source
Glycine (N)
-1.1
+0.3
+0.0
+0.1
+0.0
carbon source
Glycerol (C)
-0.9
-0.2
-0.1
+0.5
+0.2
carbon source
D-Alanine (C)
-0.3
+0.4
-0.2
-0.5
+0.0
nitrogen source
L-Citrulline (N)
-1.2
+0.5
+0.0
+0.2
+0.0
nitrogen source
L-Glutamine (N)
-0.8
+0.1
-0.0
+0.3
+0.1
carbon source
L-Malic (C)
+0.4
-0.4
+0.2
-0.7
+0.4
nitrogen source
Gly-DL-Asp (N)
-0.9
+0.2
+0.2
+0.8
-0.3
carbon source
L-Glutamine (C)
+0.4
+0.3
-0.1
-0.7
+0.2
carbon source
D-Galactose (C)
+0.7
-0.7
-0.1
-0.1
+0.3
carbon source
a-Ketoglutaric (C)
-0.2
+0.4
-0.2
-0.3
+0.4
carbon source
Putrescine (C)
-0.2
+0.5
-0.2
+0.4
-0.2
carbon source
D,L-Lactate (C)
-0.2
+0.3
-0.3
+0.6
-0.1
stress
Vancomycin 0.25 mg/ml
+0.5
+0.3
-0.1
-0.4
+0.1
carbon source
succinate (C)
+0.5
-0.2
-0.2
-0.0
+0.3
carbon source
D-Gluconic Acid (C)
-0.2
+0.6
-0.1
+0.2
+0.3
stress
nitrate 200 mM
-0.3
+0.4
+0.1
+0.6
+0.1
carbon source
D-Glucose (C)
+0.6
+0.2
+0.0
-0.2
+0.5
carbon source
L-Alanine (C)
+0.5
+0.5
+0.1
-0.1
+0.1
carbon source
L-Arabinose (C)
+0.9
+0.3
-0.2
+0.3
-0.1
carbon source
L-Tryptophan (C)
+0.5
+0.2
-0.0
+0.8
-0.0
carbon source
Glycerol (C)
+0.3
+0.8
+0.1
+0.5
+0.2
carbon source
a-Ketoglutaric (C)
+0.7
-0.1
-0.2
+0.6
+0.7
carbon source
octanoate (C)
+0.5
+0.1
+0.1
+0.6
+0.8
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