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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2521 and PfGW456L13_2522 are separated by 72 nucleotides
PfGW456L13_2522 and PfGW456L13_2523 are separated by 228 nucleotides
PfGW456L13_2523 and PfGW456L13_2524 are separated by 13 nucleotides
PfGW456L13_2524 and PfGW456L13_2525 overlap by 13 nucleotides
PfGW456L13_2521 - Long-chain fatty-acid-CoA ligase (EC 6.2.1.3), Mycobacterial subgroup FadD3, at 2,787,383 to 2,788,963
_2521
PfGW456L13_2522 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 2,789,036 to 2,789,782
_2522
PfGW456L13_2523 - Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-), at 2,790,011 to 2,791,093
_2523
PfGW456L13_2524 - Short-chain dehydrogenase/reductase SDR, at 2,791,107 to 2,791,862
_2524
PfGW456L13_2525 - Fumarate reductase flavoprotein subunit (EC 1.3.99.1), at 2,791,850 to 2,793,529
_2525
Group
Condition
PfGW456L13
_2521
PfGW456L13
_2522
PfGW456L13
_2523
PfGW456L13
_2524
PfGW456L13
_2525
carbon source
D-Lactate (C)
+0.3
+0.4
-2.0
-0.0
-0.4
carbon source
D-Gluconic Acid (C)
+0.1
-2.0
-0.2
+0.6
-0.1
stress
Lomefloxacin 0.0004 mM
-0.1
+0.0
-1.4
-0.1
+0.0
nitrogen source
L-Serine (N)
+0.2
-0.7
-0.7
+0.1
+0.0
carbon source
Glycerol (C)
+0.1
+0.2
-0.9
-0.2
-0.1
nitrogen source
L-Citrulline (N)
+0.1
-0.4
-1.2
+0.5
+0.0
nitrogen source
L-Glutamine (N)
+0.2
-0.3
-0.8
+0.1
-0.0
nitrogen source
Glycine (N)
+0.2
-0.1
-1.1
+0.3
+0.0
nitrogen source
Uridine (N)
+0.4
-0.4
-0.4
-0.1
-0.1
nitrogen source
L-Proline (N)
+0.2
+0.3
-1.4
+0.3
-0.0
nitrogen source
Gly-DL-Asp (N)
+0.2
-0.1
-0.9
+0.2
+0.2
carbon source
a-Ketoglutaric (C)
-0.0
-0.5
-0.2
+0.4
-0.2
carbon source
L-Malic (C)
-0.2
+0.5
+0.0
-0.5
+0.0
carbon source
D-Alanine (C)
-0.1
+0.2
-0.3
+0.4
-0.2
carbon source
Trisodium citrate (C)
-0.4
+0.5
+0.1
-0.2
-0.0
carbon source
D-Galactose (C)
-0.1
+0.5
+0.7
-0.7
-0.1
carbon source
Putrescine (C)
+0.2
+0.1
-0.2
+0.5
-0.2
carbon source
succinate (C)
-0.0
+0.3
+0.5
-0.2
-0.2
carbon source
L-Valine (C)
-0.1
+0.8
+0.3
-0.4
-0.2
carbon source
a-Ketoglutaric (C)
-0.1
+0.3
+0.7
-0.1
-0.2
stress
D-Cycloserine 0.125 mg/ml
+0.1
-0.2
+0.5
+0.4
-0.1
carbon source
D-Lactate (C)
-0.3
+0.3
+0.6
+0.1
+0.1
carbon source
L-Malic (C)
-0.2
+0.8
+0.4
-0.4
+0.2
carbon source
L-Glutamine (C)
-0.1
+0.4
+0.4
+0.3
-0.1
carbon source
D,L-Lactate (C)
+0.4
+0.7
-0.2
+0.3
-0.3
carbon source
L-Arabinose (C)
+0.8
+0.5
-0.6
+0.1
+0.1
carbon source
L-Tryptophan (C)
-0.1
+0.5
+0.6
-0.1
+0.1
carbon source
L-Alanine (C)
-0.0
+0.4
+0.5
+0.5
+0.1
carbon source
L-Arabinose (C)
-0.1
+0.5
+0.9
+0.3
-0.2
carbon source
Glycerol (C)
+0.0
+0.7
+0.3
+0.8
+0.1
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