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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2514 and PfGW456L13_2515 are separated by 1138 nucleotides
PfGW456L13_2515 and PfGW456L13_2516 are separated by 79 nucleotides
PfGW456L13_2516 and PfGW456L13_2517 are separated by 23 nucleotides
PfGW456L13_2517 and PfGW456L13_2518 are separated by 247 nucleotides
PfGW456L13_2514 - Transposase and inactivated derivatives, at 2,778,476 to 2,778,934
_2514
PfGW456L13_2515 - 5-nucleotidase SurE (EC 3.1.3.5), at 2,780,073 to 2,781,050
_2515
PfGW456L13_2516 - FIG002188: hypothetical protein, at 2,781,130 to 2,782,509
_2516
PfGW456L13_2517 - FIG067310: hypothetical protein, at 2,782,533 to 2,784,014
_2517
PfGW456L13_2518 - hypothetical protein, at 2,784,262 to 2,784,378
_2518
Group
Condition
PfGW456L13
_2514
PfGW456L13
_2515
PfGW456L13
_2516
PfGW456L13
_2517
PfGW456L13
_2518
nitrogen source
Gly-Glu (N)
-0.6
-0.6
-0.2
-0.1
N.D.
carbon source
Putrescine (C)
-0.1
-0.5
-0.1
-0.3
N.D.
carbon source
a-Ketoglutaric (C)
-0.0
-0.4
-0.4
-0.1
N.D.
stress
Fusidic 0.08 mg/ml
-0.0
-0.8
-0.0
-0.1
N.D.
nitrogen source
L-Aspartic Acid (N)
+0.1
-0.8
-0.1
-0.1
N.D.
nitrogen source
Gly-DL-Asp (N)
-0.1
-0.5
+0.1
-0.2
N.D.
nitrogen source
L-Lysine (N)
-0.5
+0.1
-0.2
-0.1
N.D.
nitrogen source
L-Asparagine (N)
+0.1
-0.4
-0.2
-0.1
N.D.
nitrogen source
L-Isoleucine (N)
+0.1
-0.7
+0.1
+0.0
N.D.
carbon source
octanoate (C)
+0.2
-0.6
+0.2
-0.2
N.D.
nitrogen source
Ammonium chloride (N)
+0.2
-0.6
+0.1
-0.2
N.D.
nitrogen source
L-Proline (N)
+0.2
-0.3
-0.2
-0.1
N.D.
nitrogen source
nitrate (N)
+0.2
-0.6
-0.1
+0.1
N.D.
carbon source
D-Glucose (C)
+0.2
-0.6
+0.2
-0.1
N.D.
carbon source
L-Alanine (C)
+0.1
-0.5
+0.2
-0.0
N.D.
stress
D-Cycloserine 0.125 mg/ml
+0.2
-0.4
-0.2
+0.1
N.D.
stress
Fusidic 0.03 mg/ml
-0.4
+0.3
+0.1
-0.1
N.D.
carbon source
L-Arabinose (C)
-0.3
+0.4
+0.0
-0.1
N.D.
carbon source
D-Fructose (C)
-0.3
+0.6
-0.3
+0.1
N.D.
carbon source
D-Gluconic Acid (C)
-0.4
+0.3
+0.2
+0.1
N.D.
carbon source
L-Tryptophan (C)
+0.2
+0.4
-0.1
-0.1
N.D.
carbon source
D-Alanine (C)
-0.1
+0.4
+0.1
+0.1
N.D.
carbon source
D-Mannose (C)
+0.1
+0.4
+0.1
-0.1
N.D.
stress
Lomefloxacin 0.0004 mM
+0.5
+0.5
-0.3
-0.1
N.D.
stress
Aluminum chloride 5 mM
-0.2
+0.6
+0.1
+0.1
N.D.
carbon source
D-Galactose (C)
+0.3
-0.1
+0.0
+0.4
N.D.
carbon source
L-Valine (C)
+0.1
+0.5
-0.1
+0.1
N.D.
carbon source
D-Glucosamine Hydrochloride (C)
+0.0
+0.5
+0.1
+0.2
N.D.
carbon source
D-Lactate (C)
+0.1
+0.4
+0.2
+0.2
N.D.
carbon source
L-Lactate (C)
+0.2
+0.4
+0.2
+0.1
N.D.
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