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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2371 and PfGW456L13_2372 are separated by 250 nucleotides
PfGW456L13_2372 and PfGW456L13_2373 are separated by 187 nucleotides
PfGW456L13_2373 and PfGW456L13_2374 are separated by 259 nucleotides
PfGW456L13_2374 and PfGW456L13_2375 are separated by 72 nucleotides
PfGW456L13_2371 - hypothetical protein, at 2,605,644 to 2,606,033
_2371
PfGW456L13_2372 - ABC transporter, permease protein, at 2,606,284 to 2,607,456
_2372
PfGW456L13_2373 - Probable thioesterase involved in non-ribosomal peptide biosynthesis, PA2411 homolog, at 2,607,644 to 2,608,378
_2373
PfGW456L13_2374 - Non-ribosomal peptide synthetase modules, pyoverdine, at 2,608,638 to 2,617,844
_2374
PfGW456L13_2375 - SyrP-like protein, at 2,617,917 to 2,618,975
_2375
Group
Condition
PfGW456L13
_2371
PfGW456L13
_2372
PfGW456L13
_2373
PfGW456L13
_2374
PfGW456L13
_2375
carbon source
L-Arabinose (C)
-1.9
+0.1
N.D.
-0.0
+0.2
nitrogen source
L-Lysine (N)
+0.1
-0.5
N.D.
-0.0
-0.2
stress
Cobalt chloride 0.16 mM
-0.4
-0.4
N.D.
+0.0
+0.1
carbon source
D-Alanine (C)
-0.7
+0.1
N.D.
+0.1
+0.1
carbon source
L-Tryptophan (C)
-0.6
-0.0
N.D.
+0.0
+0.2
carbon source
L-Tryptophan (C)
+0.3
-0.7
N.D.
-0.0
+0.1
carbon source
D-Gluconic Acid (C)
-0.5
-0.3
N.D.
+0.2
+0.3
carbon source
D-Lactate (C)
-0.5
+0.3
N.D.
-0.1
+0.1
carbon source
a-Ketoglutaric (C)
+0.4
-0.2
N.D.
-0.2
-0.2
nitrogen source
L-Serine (N)
-0.2
+0.4
N.D.
+0.0
-0.2
carbon source
L-Valine (C)
-0.1
+0.5
N.D.
-0.0
-0.2
carbon source
D,L-Lactate (C)
+0.6
-0.8
N.D.
+0.0
+0.3
stress
Aluminum chloride 2.5 mM
+0.5
-0.3
N.D.
-0.1
+0.1
stress
A22 0.04 mg/ml
+0.5
-0.1
N.D.
-0.0
+0.2
carbon source
D-Glucose (C)
+0.8
-0.3
N.D.
-0.0
+0.0
stress
Fusidic 0.03 mg/ml
+0.6
-0.3
N.D.
-0.0
+0.4
nitrogen source
Gly-Glu (N)
+0.2
+0.5
N.D.
+0.1
-0.2
carbon source
Tween 20 (C)
+0.6
+0.2
N.D.
-0.1
-0.2
nitrogen source
Ammonium chloride (N)
+0.4
+0.5
N.D.
+0.1
-0.3
nitrogen source
L-Proline (N)
+0.2
+0.6
N.D.
-0.1
-0.1
carbon source
L-Malic (C)
+0.5
-0.2
N.D.
+0.1
+0.2
stress
Bacitracin 0.5 mg/ml
+0.5
-0.1
N.D.
+0.0
+0.2
carbon source
D-Fructose (C)
-0.2
+0.8
N.D.
+0.1
+0.1
stress
Vancomycin 0.5 mg/ml
+0.6
+0.2
N.D.
+0.0
-0.0
carbon source
D-Mannose (C)
+0.3
+0.5
N.D.
+0.0
+0.0
carbon source
L-Lactate (C)
+0.6
+0.7
N.D.
+0.0
-0.3
carbon source
octanoate (C)
+1.0
-0.3
N.D.
+0.1
+0.1
carbon source
D-Alanine (C)
+0.2
+0.8
N.D.
-0.0
+0.1
stress
Dimethyl Sulfoxide 7.5 vol%
+0.7
+0.2
N.D.
-0.0
+0.2
carbon source
D-Lactate (C)
+0.7
+0.5
N.D.
+0.0
+0.3
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