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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_5202 and PfGW456L13_5203 are separated by 153 nucleotides
PfGW456L13_5203 and PfGW456L13_2323 are separated by 276 nucleotides
PfGW456L13_2323 and PfGW456L13_2324 are separated by 12 nucleotides
PfGW456L13_2324 and PfGW456L13_2325 are separated by 155 nucleotides
PfGW456L13_5202 - Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA, at 2,549,633 to 2,552,525
_5202
PfGW456L13_5203 - 5S RNA, at 2,552,679 to 2,552,798
_5203
PfGW456L13_2323 - Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129), at 2,553,075 to 2,554,967
_2323
PfGW456L13_2324 - Chromosome initiation inhibitor, at 2,554,980 to 2,555,939
_2324
PfGW456L13_2325 - Major facilitator family transporter, at 2,556,095 to 2,557,396
_2325
Group
Condition
PfGW456L13
_5202
PfGW456L13
_5203
PfGW456L13
_2323
PfGW456L13
_2324
PfGW456L13
_2325
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
-0.3
-0.3
-0.4
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
+0.1
-0.1
-0.6
nitrogen source
L-Phenylalanine (N)
N.D.
N.D.
+0.0
-0.5
-0.2
stress
Fusidic 0.03 mg/ml
N.D.
N.D.
-0.0
-0.2
-0.4
nitrogen source
NAG (N)
N.D.
N.D.
-0.1
-0.2
-0.2
stress
Cephalothin 3 mg/ml
N.D.
N.D.
+0.0
-0.4
-0.1
nitrogen source
L-Leucine (N)
N.D.
N.D.
-0.1
-0.3
-0.1
nitrogen source
L-Histidine (N)
N.D.
N.D.
-0.1
-0.1
-0.2
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
N.D.
N.D.
-0.2
+0.1
-0.3
carbon source
L-Phenylalanine (C)
N.D.
N.D.
-0.1
-0.2
-0.1
carbon source
D-Lactate (C)
N.D.
N.D.
+0.0
-0.2
-0.2
carbon source
D-Mannose (C)
N.D.
N.D.
+0.0
-0.2
-0.2
carbon source
D-Glucosamine Hydrochloride (C)
N.D.
N.D.
-0.0
+0.0
-0.4
carbon source
casaminos (C)
N.D.
N.D.
+0.0
-0.3
-0.1
carbon source
D-Fructose (C)
N.D.
N.D.
-0.2
+0.2
-0.3
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
-0.0
+0.2
-0.3
carbon source
D-Galactose (C)
N.D.
N.D.
-0.2
+0.2
-0.1
carbon source
L-Tryptophan (C)
N.D.
N.D.
+0.2
-0.0
-0.3
carbon source
Glycerol (C)
N.D.
N.D.
+0.1
-0.3
+0.1
carbon source
L-Glutamine (C)
N.D.
N.D.
+0.1
-0.3
+0.1
carbon source
D,L-Lactate (C)
N.D.
N.D.
-0.1
+0.2
-0.2
stress
nitrite 5 mM
N.D.
N.D.
-0.0
-0.2
+0.2
carbon source
octanoate (C)
N.D.
N.D.
+0.2
+0.2
-0.4
carbon source
D-Glucose (C)
N.D.
N.D.
+0.2
+0.2
-0.3
carbon source
D-Lactate (C)
N.D.
N.D.
+0.1
-0.1
+0.2
carbon source
succinate (C)
N.D.
N.D.
+0.2
-0.1
+0.2
carbon source
D-Glucosamine Hydrochloride (C)
N.D.
N.D.
+0.2
+0.2
-0.0
carbon source
D-Serine (C)
N.D.
N.D.
+0.3
+0.1
-0.0
stress
Aluminum chloride 5 mM
N.D.
N.D.
-0.0
+0.5
+0.1
carbon source
D-Fructose (C)
N.D.
N.D.
-0.1
+0.4
+0.3
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