Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 116 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
PfGW456L13_2308 and PfGW456L13_2309 overlap by 4 nucleotides
PfGW456L13_2309 and PfGW456L13_2310 overlap by 4 nucleotides
PfGW456L13_2310 and PfGW456L13_2311 are separated by 289 nucleotides
PfGW456L13_2311 and PfGW456L13_2312 are separated by 126 nucleotides
PfGW456L13_2308 - FIG137877: Hypothetical protein in pyoverdin gene cluster, at 2,535,283 to 2,535,612
_2308
PfGW456L13_2309 - FIG139991: Putative thiamine pyrophosphate-requiring enzyme, at 2,535,609 to 2,536,151
_2309
PfGW456L13_2310 - FIG137594: Putative iron-regulated membrane protein, at 2,536,148 to 2,537,350
_2310
PfGW456L13_2311 - PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein, at 2,537,640 to 2,538,098
_2311
PfGW456L13_2312 - Redox-sensitive transcriptional activator SoxR, at 2,538,225 to 2,538,680
_2312
Group
Condition
PfGW456L13
_2308
PfGW456L13
_2309
PfGW456L13
_2310
PfGW456L13
_2311
PfGW456L13
_2312
carbon source
Trisodium citrate (C)
-4.1
-4.6
-6.9
-0.2
-0.2
carbon source
D-Gluconic Acid (C)
-0.0
-2.2
-2.8
+0.1
-0.4
carbon source
D-Gluconic Acid (C)
-0.3
-1.8
-2.4
+0.6
-0.1
carbon source
octanoate (C)
-0.8
+0.2
-0.7
+0.2
-0.1
stress
Vancomycin 0.25 mg/ml
-0.3
-0.3
-0.3
-0.0
-0.3
nitrogen source
L-Asparagine (N)
+0.1
-0.5
-0.1
-0.5
-0.2
stress
Zinc 1 mM
+0.1
+0.0
-0.8
-0.2
-0.2
carbon source
a-Ketoglutaric (C)
-0.6
+0.0
+0.3
-0.1
-0.6
stress
Benzethonium chloride 0.0125 mM
-0.5
-0.2
-0.4
+0.1
+0.0
carbon source
D-Fructose (C)
+0.2
-0.3
-0.3
-0.2
-0.2
carbon source
D-Galactose (C)
+0.2
-0.4
-0.3
-0.4
+0.1
nitrogen source
L-Aspartic Acid (N)
+0.1
-0.2
+0.2
-0.3
-0.5
stress
Paraquat dichloride 0.032 mg/ml
-0.2
+0.5
-0.2
-0.3
-0.3
lb
LB
+0.1
-0.6
-0.1
-0.2
+0.3
carbon source
D-Lactate (C)
+0.1
-0.1
-0.3
+0.3
-0.4
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.3
-0.3
+0.2
+0.3
-0.2
stress
Bacitracin 0.5 mg/ml
+0.4
+0.2
-0.1
-0.5
-0.1
nitrogen source
Gly-Glu (N)
+0.3
-0.6
+0.2
-0.4
+0.4
stress
Cobalt chloride 0.16 mM
-0.0
+0.7
-0.4
-0.1
-0.2
carbon source
D-Glucosamine Hydrochloride (C)
+0.1
+0.4
-0.5
-0.1
+0.2
carbon source
a-Ketoglutaric (C)
+0.5
+0.4
-0.1
+0.0
-0.7
carbon source
D-Glucose (C)
+0.4
-0.4
-0.5
+0.7
+0.1
carbon source
D-Galactose (C)
-0.5
+0.4
+0.1
+0.2
+0.2
carbon source
L-Malic (C)
-0.7
+0.9
+0.3
+0.2
-0.2
carbon source
D-Serine (C)
+0.4
+0.5
-0.0
-0.1
-0.2
carbon source
D-Glucosamine Hydrochloride (C)
+0.2
+0.5
+0.1
+0.5
-0.6
carbon source
L-Phenylalanine (C)
+0.2
+0.4
-0.3
+0.2
+0.2
carbon source
Putrescine (C)
-0.2
+0.7
+0.3
+0.1
+0.2
carbon source
L-Lactate (C)
+1.1
+0.5
-0.3
+0.2
-0.3
carbon source
D-Lactate (C)
+0.5
+0.4
-0.1
-0.1
+0.4
remove
PfGW456L13_2308
plot
remove
PfGW456L13_2309
plot
remove
PfGW456L13_2310
remove
PfGW456L13_2311
plot
remove
PfGW456L13_2312
plot