Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_2298 and PfGW456L13_2299 are separated by 1146 nucleotidesPfGW456L13_2299 and PfGW456L13_2300 overlap by 4 nucleotidesPfGW456L13_2300 and PfGW456L13_2301 are separated by 197 nucleotidesPfGW456L13_2301 and PfGW456L13_2302 are separated by 81 nucleotides PfGW456L13_2298 - Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8), at 2,524,136 to 2,525,872 _2298 PfGW456L13_2299 - Two-component system response regulator QseB, at 2,527,019 to 2,527,699 _2299 PfGW456L13_2300 - Sensor histidine kinase, at 2,527,696 to 2,529,021 _2300 PfGW456L13_2301 - Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase (EC 2.6.1.76), at 2,529,219 to 2,530,619 _2301 PfGW456L13_2302 - FIG006220: Hypothetical MbtH-like protein, at 2,530,701 to 2,530,928 _2302
Group Condition PfGW456L13_2298 PfGW456L13_2299 PfGW456L13_2300 PfGW456L13_2301 PfGW456L13_2302
carbon source L-Lactate (C) +0.4 +0.0 -1.9 +0.2 -1.3
carbon source D-Alanine (C) -0.1 -0.5 -0.3 -0.1 -0.6
lb LB -0.2 -0.5 -0.6 +0.1 -0.3
carbon source D-Fructose (C) +0.1 -0.7 -0.3 -0.2 -0.2
carbon source D-Galactose (C) -0.3 +0.1 -0.9 -0.3 +0.1
stress Fusidic 0.03 mg/ml +0.1 -1.4 -0.2 +0.2 +0.1
carbon source D-Fructose (C) +0.2 -0.1 -0.2 -0.2 -1.0
stress Bacitracin 1 mg/ml -0.0 -0.8 +0.1 -0.0 -0.5
carbon source Putrescine (C) +0.1 -0.5 +0.5 -0.2 -1.2
carbon source octanoate (C) +0.4 -0.9 -0.2 -0.5 +0.0
carbon source L-Tryptophan (C) -0.2 +0.2 -0.3 -0.3 -0.6
carbon source D-Mannose (C) +0.0 -0.7 +0.3 -0.0 -0.7
carbon source L-Arabinose (C) +0.0 -0.7 +0.8 -0.0 -1.1
carbon source a-Ketoglutaric (C) -0.4 +0.6 -0.8 +0.2 -0.6
carbon source D-Gluconic Acid (C) +0.1 -1.1 -0.5 +0.1 +0.5
stress Cephalothin 3 mg/ml -0.2 -0.7 +0.2 +0.3 -0.5
stress Lomefloxacin 0.0004 mM -0.1 -0.2 +0.3 +0.1 -0.8
carbon source a-Ketoglutaric (C) +0.1 +1.1 +0.0 -0.1 -1.9
carbon source L-Glutamine (C) +0.2 -1.3 +0.3 +0.1 +0.1
stress D-Cycloserine 0.125 mg/ml -0.3 -0.7 +0.4 +0.1 -0.1
carbon source L-Tryptophan (C) -0.1 +0.4 -0.8 +0.1 -0.2
carbon source D-Lactate (C) +0.1 +0.4 -0.5 +0.3 -0.5
carbon source D-Glucose (C) +0.4 -0.7 -0.1 +0.3 -0.2
carbon source L-Arabinose (C) -0.7 +0.4 +0.9 -0.4 -0.4
carbon source Trisodium citrate (C) +0.3 -0.1 -1.3 +0.2 +0.8
stress Paraquat dichloride 0.032 mg/ml -0.2 +0.6 -0.3 +0.3 -0.3
carbon source D,L-Lactate (C) -0.2 +0.4 -0.2 +0.4 -0.3
nitrogen source L-Proline (N) +0.1 +0.4 -0.6 +0.2 +0.3
carbon source D-Gluconic Acid (C) +0.5 +0.4 -1.0 -0.1 +0.9
nitrogen source Putrescine (N) +0.2 +0.6 -0.2 +0.3 -0.1
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