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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_2295 and PfGW456L13_2296 are separated by 94 nucleotides
PfGW456L13_2296 and PfGW456L13_2297 overlap by 25 nucleotides
PfGW456L13_2297 and PfGW456L13_2298 overlap by 1 nucleotides
PfGW456L13_2298 and PfGW456L13_2299 are separated by 1146 nucleotides
PfGW456L13_2295 - Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24), at 2,521,632 to 2,522,444
_2295
PfGW456L13_2296 - Thiol:disulfide interchange protein DsbG precursor, at 2,522,539 to 2,523,306
_2296
PfGW456L13_2297 - Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase, at 2,523,282 to 2,524,136
_2297
PfGW456L13_2298 - Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8), at 2,524,136 to 2,525,872
_2298
PfGW456L13_2299 - Two-component system response regulator QseB, at 2,527,019 to 2,527,699
_2299
Group
Condition
PfGW456L13
_2295
PfGW456L13
_2296
PfGW456L13
_2297
PfGW456L13
_2298
PfGW456L13
_2299
carbon source
a-Ketoglutaric (C)
-0.2
-0.8
-2.3
-0.4
+0.6
carbon source
D-Gluconic Acid (C)
+0.1
-0.5
-1.6
+0.1
-1.1
carbon source
L-Glutamine (C)
+0.2
-0.4
-0.6
+0.2
-1.3
stress
Cephalothin 3 mg/ml
+0.2
+0.1
-1.4
-0.2
-0.7
carbon source
succinate (C)
-0.3
-0.1
-1.4
-0.2
+0.1
nitrogen source
L-Aspartic Acid (N)
-0.1
-0.1
-1.2
+0.0
-0.4
stress
Thallium(I) acetate 0.002 mg/ml
+0.1
+0.1
-1.6
-0.5
+0.2
stress
Fusidic 0.03 mg/ml
+0.3
+0.2
-0.7
+0.1
-1.4
stress
Thallium(I) acetate 0.008 mg/ml
-0.1
+0.2
-1.4
-0.2
+0.0
carbon source
Putrescine (C)
+0.1
-0.9
-0.2
+0.1
-0.5
carbon source
L-Malic (C)
-0.3
-0.3
-0.8
-0.2
+0.2
carbon source
Glycerol (C)
+0.1
-0.4
-1.4
+0.3
-0.0
carbon source
Glycerol (C)
-0.3
+0.2
-0.7
-0.2
-0.4
carbon source
octanoate (C)
+0.2
+0.6
-1.4
+0.4
-0.9
stress
Thallium(I) acetate 0.004 mg/ml
+0.1
-0.2
-1.3
-0.1
+0.3
carbon source
D-Serine (C)
+0.1
-0.5
-1.0
+0.0
+0.2
carbon source
Trisodium citrate (C)
-0.1
+0.1
-1.2
+0.3
-0.1
stress
D-Cycloserine 0.125 mg/ml
+0.1
+0.4
-0.6
-0.3
-0.7
carbon source
L-Malic (C)
-0.0
+0.0
-1.5
+0.0
+0.4
stress
A22 0.04 mg/ml
+0.2
+0.2
-1.2
-0.2
-0.0
carbon source
D-Glucose (C)
+0.0
-0.2
-0.4
+0.4
-0.7
carbon source
D-Lactate (C)
+0.0
+0.3
-1.3
+0.0
+0.1
carbon source
L-Arabinose (C)
+0.1
-0.4
-0.3
-0.7
+0.4
carbon source
D,L-Lactate (C)
+0.4
+0.3
-1.6
-0.2
+0.4
carbon source
D-Serine (C)
+0.1
-0.3
-0.9
+0.2
+0.2
carbon source
D-Gluconic Acid (C)
-0.6
-0.1
-0.7
+0.5
+0.4
carbon source
D-Lactate (C)
+0.3
-0.5
-0.7
+0.1
+0.4
nitrogen source
L-Isoleucine (N)
-0.2
+0.4
-0.7
+0.1
+0.6
stress
Aluminum chloride 5 mM
-0.0
+0.4
+0.7
-0.2
-0.4
carbon source
a-Ketoglutaric (C)
+0.4
+0.0
-0.4
+0.1
+1.1
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