Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_222 and PfGW456L13_223 are separated by 12 nucleotidesPfGW456L13_223 and PfGW456L13_224 are separated by 257 nucleotidesPfGW456L13_224 and PfGW456L13_225 are separated by 142 nucleotidesPfGW456L13_225 and PfGW456L13_226 are separated by 100 nucleotides PfGW456L13_222 - hypothetical protein, at 260,353 to 260,469 _222 PfGW456L13_223 - Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12), at 260,482 to 264,432 _223 PfGW456L13_224 - Acyl-CoA dehydrogenase (EC 1.3.8.7), at 264,690 to 266,492 _224 PfGW456L13_225 - Methyl-accepting chemotaxis protein, at 266,635 to 268,572 _225 PfGW456L13_226 - FIG00959437: hypothetical protein, at 268,673 to 268,975 _226
Group Condition PfGW456L13_222 PfGW456L13_223 PfGW456L13_224 PfGW456L13_225 PfGW456L13_226
nitrogen source L-Proline (N) N.D. -5.1 +0.0 +0.0 +0.4
carbon source L-Arabinose (C) N.D. -0.3 +0.2 -0.7 -2.8
carbon source D-Galactose (C) N.D. -0.5 -0.3 -0.2 -1.5
carbon source Putrescine (C) N.D. -0.4 +0.1 +0.0 -1.7
carbon source D-Gluconic Acid (C) N.D. -0.2 +0.1 -0.4 -1.4
carbon source D-Fructose (C) N.D. -0.1 +0.0 -0.6 -1.1
carbon source L-Glutamine (C) N.D. -0.3 +0.0 -0.2 -1.2
stress nitrate 200 mM N.D. -0.0 +0.0 -0.1 -1.1
carbon source D-Gluconic Acid (C) N.D. -0.2 -0.1 +0.2 -1.1
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x N.D. -0.4 -0.2 +0.1 -0.6
carbon source L-Valine (C) N.D. +0.4 +0.0 -0.3 -0.9
carbon source D-Lactate (C) N.D. -0.0 +0.3 +0.2 -1.1
carbon source octanoate (C) N.D. -0.2 +0.3 -1.2 +0.5
carbon source L-Tryptophan (C) N.D. +0.4 +0.0 +0.2 -1.1
carbon source D-Glucosamine Hydrochloride (C) N.D. -0.1 +0.2 +0.3 -0.8
nitrogen source L-Serine (N) N.D. -0.7 -0.0 -0.1 +1.0
nitrogen source L-Valine (N) N.D. -0.6 -0.1 -0.0 +0.9
carbon source L-Alanine (C) N.D. +1.3 -0.1 -0.1 -0.4
carbon source D-Alanine (C) N.D. +1.8 +0.0 -0.0 -0.7
carbon source D-Fructose (C) N.D. +0.3 +0.2 -0.4 +1.0
carbon source a-Ketoglutaric (C) N.D. +0.1 -0.1 +0.6 +0.8
nitrogen source D-Alanine (N) N.D. +1.2 -0.0 +0.0 +0.1
nitrogen source L-Alanine (N) N.D. +0.8 +0.0 -0.1 +0.7
carbon source D-Glucose (C) N.D. -0.5 +0.1 +0.2 +1.8
nitrogen source L-Threonine (N) N.D. +1.1 +0.1 +0.1 +0.4
nitrogen source L-Isoleucine (N) N.D. +1.3 +0.1 -0.0 +0.3
carbon source L-Alanine (C) N.D. +1.3 -0.0 -0.1 +0.5
carbon source D-Alanine (C) N.D. +1.8 -0.0 -0.2 +0.3
nitrogen source L-Phenylalanine (N) N.D. +1.5 -0.1 +0.0 +0.4
nitrogen source L-Leucine (N) N.D. +2.1 +0.1 +0.2 -0.3
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