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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_219 and PfGW456L13_220 are separated by 243 nucleotides
PfGW456L13_220 and PfGW456L13_221 are separated by 427 nucleotides
PfGW456L13_221 and PfGW456L13_222 are separated by 332 nucleotides
PfGW456L13_222 and PfGW456L13_223 are separated by 12 nucleotides
PfGW456L13_219 - Protein involved in catabolism of external DNA, at 256,789 to 257,628
_219
PfGW456L13_220 - hypothetical protein, at 257,872 to 258,108
_220
PfGW456L13_221 - Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter, at 258,536 to 260,020
_221
PfGW456L13_222 - hypothetical protein, at 260,353 to 260,469
_222
PfGW456L13_223 - Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12), at 260,482 to 264,432
_223
Group
Condition
PfGW456L13
_219
PfGW456L13
_220
PfGW456L13
_221
PfGW456L13
_222
PfGW456L13
_223
nitrogen source
L-Proline (N)
-0.0
+0.0
+0.1
N.D.
-5.1
nitrogen source
L-Serine (N)
-0.2
+0.0
-0.7
N.D.
-0.7
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.4
-0.1
-0.0
N.D.
-0.4
carbon source
succinate (C)
+0.0
-0.7
+0.2
N.D.
-0.2
carbon source
D-Galactose (C)
+0.2
-0.3
+0.1
N.D.
-0.5
carbon source
L-Arabinose (C)
+0.3
-0.6
+0.2
N.D.
-0.3
stress
Dimethyl Sulfoxide 7.5 vol%
-0.3
+0.4
-0.3
N.D.
-0.1
nitrogen source
D-Serine (N)
+0.3
-0.3
-0.3
N.D.
+0.3
carbon source
D-Galactose (C)
-0.4
+0.4
+0.1
N.D.
-0.1
carbon source
D-Glucose (C)
+0.2
+0.2
+0.1
N.D.
-0.5
carbon source
D,L-Lactate (C)
+0.0
+0.4
+0.1
N.D.
-0.4
nitrogen source
L-Glutamic (N)
-0.2
+0.6
-0.0
N.D.
-0.2
carbon source
D-Fructose (C)
+0.3
-0.3
+0.3
N.D.
-0.1
stress
Paraquat dichloride 0.032 mg/ml
+0.2
+0.3
+0.1
N.D.
-0.3
carbon source
L-Valine (C)
-0.5
+0.4
+0.1
N.D.
+0.4
carbon source
D-Gluconic Acid (C)
+0.1
+0.7
+0.0
N.D.
-0.2
nitrogen source
Glycine (N)
-0.2
+0.4
-0.0
N.D.
+0.5
carbon source
L-Alanine (C)
+0.1
-0.5
+0.0
N.D.
+1.3
carbon source
Trisodium citrate (C)
-0.1
+0.5
+0.3
N.D.
+0.2
stress
Aluminum chloride 2.5 mM
+0.2
-0.0
+0.4
N.D.
+0.3
nitrogen source
D-Alanine (N)
-0.1
-0.0
-0.0
N.D.
+1.2
carbon source
D-Fructose (C)
+0.3
+0.3
+0.1
N.D.
+0.3
nitrogen source
L-Threonine (N)
+0.1
-0.1
-0.0
N.D.
+1.1
carbon source
D-Lactate (C)
+0.1
+0.7
+0.2
N.D.
+0.1
carbon source
L-Alanine (C)
+0.1
+0.2
-0.1
N.D.
+1.3
nitrogen source
L-Isoleucine (N)
-0.0
+0.4
-0.0
N.D.
+1.3
carbon source
D-Alanine (C)
+0.0
+0.2
-0.1
N.D.
+1.8
nitrogen source
L-Phenylalanine (N)
+0.2
+0.4
-0.1
N.D.
+1.5
carbon source
D-Alanine (C)
+0.1
+0.4
-0.3
N.D.
+1.8
nitrogen source
L-Leucine (N)
+0.1
+0.2
-0.0
N.D.
+2.1
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