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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2163 and PfGW456L13_2164 are separated by 3 nucleotides
PfGW456L13_2164 and PfGW456L13_2165 overlap by 8 nucleotides
PfGW456L13_2165 and PfGW456L13_2166 are separated by 187 nucleotides
PfGW456L13_2166 and PfGW456L13_2167 are separated by 43 nucleotides
PfGW456L13_2163 - Rhodanese domain protein UPF0176, at 2,366,290 to 2,367,231
_2163
PfGW456L13_2164 - Thioredoxin, at 2,367,235 to 2,367,870
_2164
PfGW456L13_2165 - Lipid A export ATP-binding/permease protein MsbA, at 2,367,863 to 2,369,680
_2165
PfGW456L13_2166 - Sensory box/GGDEF family protein, at 2,369,868 to 2,372,327
_2166
PfGW456L13_2167 - Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C, at 2,372,371 to 2,373,165
_2167
Group
Condition
PfGW456L13
_2163
PfGW456L13
_2164
PfGW456L13
_2165
PfGW456L13
_2166
PfGW456L13
_2167
carbon source
L-Lactate (C)
-1.7
-0.3
+0.1
-0.4
+0.1
carbon source
D-Gluconic Acid (C)
-0.6
-0.9
-0.2
-0.3
+0.1
carbon source
Glycerol (C)
-0.3
-1.4
+0.0
-0.0
-0.3
carbon source
D-Galactose (C)
-0.4
-0.6
-0.3
-0.3
-0.0
nitrogen source
Gly-Glu (N)
-1.0
-0.4
-0.1
-0.0
+0.0
carbon source
L-Alanine (C)
-0.1
-1.0
-0.1
-0.1
+0.1
carbon source
D-Galactose (C)
-0.8
-0.5
-0.0
-0.0
+0.1
carbon source
Putrescine (C)
-0.6
-0.9
-0.0
+0.4
-0.1
lb
LB
+0.1
-1.2
-0.1
+0.0
-0.0
carbon source
D-Fructose (C)
-0.6
-0.4
-0.1
-0.1
-0.1
carbon source
L-Arabinose (C)
-0.5
-0.4
-0.2
+0.0
-0.0
carbon source
octanoate (C)
-1.7
+0.5
+0.0
-0.2
+0.1
nitrogen source
Gly-DL-Asp (N)
-0.2
-0.9
-0.2
+0.1
+0.1
carbon source
D-Lactate (C)
-0.8
-0.3
+0.0
+0.0
-0.1
carbon source
casaminos (C)
-0.7
-0.3
-0.1
+0.0
+0.0
stress
Vancomycin 0.5 mg/ml
-0.3
-0.4
-0.2
+0.1
-0.1
nitrogen source
L-Proline (N)
-0.3
-0.5
+0.1
-0.1
-0.0
carbon source
L-Glutamine (C)
-0.6
-0.2
-0.2
+0.1
+0.0
carbon source
succinate (C)
-0.8
-0.1
+0.1
+0.1
+0.0
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.9
+0.2
+0.1
-0.0
+0.1
carbon source
L-Tryptophan (C)
-0.7
+0.4
-0.1
-0.0
+0.0
carbon source
L-Malic (C)
-0.7
+0.2
-0.0
-0.1
+0.0
carbon source
L-Tryptophan (C)
-0.8
+0.5
-0.0
-0.1
-0.0
carbon source
D-Glucose (C)
-0.3
+0.4
-0.1
-0.3
-0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.5
-0.2
+0.2
+0.0
+0.2
carbon source
L-Histidine (C)
-0.6
+0.3
-0.1
+0.1
+0.2
carbon source
D,L-Lactate (C)
-0.2
-0.4
+0.2
+0.3
+0.1
carbon source
D-Gluconic Acid (C)
-1.0
+1.0
+0.0
+0.1
-0.0
carbon source
a-Ketoglutaric (C)
-0.4
+0.5
-0.1
-0.0
+0.1
nitrogen source
L-Glutamic (N)
-0.5
+0.6
+0.1
-0.1
+0.1
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