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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2104 and PfGW456L13_2105 are separated by 16 nucleotides
PfGW456L13_2105 and PfGW456L13_2106 are separated by 196 nucleotides
PfGW456L13_2106 and PfGW456L13_2107 are separated by 145 nucleotides
PfGW456L13_2107 and PfGW456L13_2108 overlap by 1 nucleotides
PfGW456L13_2104 - Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39), at 2,309,773 to 2,310,657
_2104
PfGW456L13_2105 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 2,310,674 to 2,311,414
_2105
PfGW456L13_2106 - Acyl carrier protein, at 2,311,611 to 2,311,847
_2106
PfGW456L13_2107 - 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179), at 2,311,993 to 2,313,201
_2107
PfGW456L13_2108 - Aminodeoxychorismate lyase (EC 4.1.3.38), at 2,313,201 to 2,314,016
_2108
Group
Condition
PfGW456L13
_2104
PfGW456L13
_2105
PfGW456L13
_2106
PfGW456L13
_2107
PfGW456L13
_2108
nitrogen source
L-Glutamine (N)
N.D.
N.D.
N.D.
-3.0
-0.5
nitrogen source
L-Histidine (N)
N.D.
N.D.
N.D.
-2.4
-0.1
nitrogen source
L-Proline (N)
N.D.
N.D.
N.D.
-1.8
-0.5
stress
Cobalt chloride 0.16 mM
N.D.
N.D.
N.D.
-2.0
-0.0
nitrogen source
L-Aspartic Acid (N)
N.D.
N.D.
N.D.
-2.1
+0.0
carbon source
L-Phenylalanine (C)
N.D.
N.D.
N.D.
-0.4
-1.5
carbon source
L-Phenylalanine (C)
N.D.
N.D.
N.D.
-0.5
-1.5
nitrogen source
L-Glutamic (N)
N.D.
N.D.
N.D.
-1.5
-0.3
stress
Cephalothin 3 mg/ml
N.D.
N.D.
N.D.
-1.6
-0.1
nitrogen source
L-Tryptophan (N)
N.D.
N.D.
N.D.
-1.8
+0.1
control
LB control
N.D.
N.D.
N.D.
-1.7
+0.0
carbon source
Trisodium citrate (C)
N.D.
N.D.
N.D.
-1.1
-0.6
carbon source
D-Mannose (C)
N.D.
N.D.
N.D.
-1.8
+0.2
nitrogen source
Cytosine (N)
N.D.
N.D.
N.D.
-1.2
-0.3
nitrogen source
L-Asparagine (N)
N.D.
N.D.
N.D.
-1.7
+0.3
stress
Fusidic 0.08 mg/ml
N.D.
N.D.
N.D.
-1.3
-0.1
carbon source
casaminos (C)
N.D.
N.D.
N.D.
-1.2
-0.2
carbon source
D-Fructose (C)
N.D.
N.D.
N.D.
-0.9
-0.5
nitrogen source
L-Valine (N)
N.D.
N.D.
N.D.
-0.9
-0.4
stress
Paraquat dichloride 0.032 mg/ml
N.D.
N.D.
N.D.
-1.5
+0.2
nitrogen source
L-Alanine (N)
N.D.
N.D.
N.D.
-1.3
+0.1
carbon source
D-Lactate (C)
N.D.
N.D.
N.D.
-1.1
+0.3
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
-1.1
+0.5
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
N.D.
-0.8
+0.7
stress
Aluminum chloride 2.5 mM
N.D.
N.D.
N.D.
+1.0
-0.5
carbon source
D-Glucosamine Hydrochloride (C)
N.D.
N.D.
N.D.
+1.2
-0.4
stress
Vancomycin 0.5 mg/ml
N.D.
N.D.
N.D.
+1.5
-0.4
carbon source
L-Glutamine (C)
N.D.
N.D.
N.D.
+1.5
-0.2
carbon source
L-Valine (C)
N.D.
N.D.
N.D.
+1.4
+0.2
carbon source
octanoate (C)
N.D.
N.D.
N.D.
+3.5
+0.5
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