Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_2096 and PfGW456L13_2097 are separated by 486 nucleotidesPfGW456L13_2097 and PfGW456L13_2098 overlap by 14 nucleotidesPfGW456L13_2098 and PfGW456L13_2099 are separated by 24 nucleotidesPfGW456L13_2099 and PfGW456L13_2100 are separated by 54 nucleotides PfGW456L13_2096 - hypothetical protein, at 2,303,870 to 2,304,004 _2096 PfGW456L13_2097 - Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70), at 2,304,491 to 2,305,453 _2097 PfGW456L13_2098 - Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C, at 2,305,440 to 2,306,102 _2098 PfGW456L13_2099 - Periplasmic serine proteases (ClpP class), at 2,306,127 to 2,307,116 _2099 PfGW456L13_2100 - FIG146278: Maf/YceF/YhdE family protein, at 2,307,171 to 2,307,749 _2100
Group Condition PfGW456L13_2096 PfGW456L13_2097 PfGW456L13_2098 PfGW456L13_2099 PfGW456L13_2100
carbon source L-Tryptophan (C) N.D. -1.0 -0.1 -0.4 -0.2
carbon source Putrescine (C) N.D. -1.2 -0.4 -0.2 +0.1
carbon source a-Ketoglutaric (C) N.D. -0.8 -0.9 +0.2 -0.3
carbon source octanoate (C) N.D. +0.9 -0.1 -1.0 -1.6
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x N.D. -1.6 -0.1 +0.1 +0.1
carbon source L-Tryptophan (C) N.D. -0.6 -0.1 -0.2 -0.6
carbon source L-Arabinose (C) N.D. -0.5 -0.1 -0.1 -0.7
carbon source L-Arabinose (C) N.D. -0.1 -0.6 -0.3 -0.3
carbon source D-Alanine (C) N.D. -0.5 -0.3 -0.1 -0.5
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x N.D. -1.1 -0.2 +0.1 -0.1
carbon source D-Glucose (C) N.D. -0.6 -0.1 -0.1 -0.5
control LB control N.D. -0.9 +0.1 -0.1 -0.3
carbon source L-Malic (C) N.D. -0.2 -0.4 +0.2 -0.8
carbon source L-Glutamine (C) N.D. -1.0 -0.1 -0.2 +0.3
carbon source D-Lactate (C) N.D. -0.2 -0.2 +0.1 -0.8
carbon source L-Histidine (C) N.D. -0.5 -0.1 -0.4 -0.0
stress nitrite 10 mM N.D. -0.9 -0.1 -0.1 +0.2
nitrogen source L-Threonine (N) N.D. +0.1 -1.0 -0.0 -0.0
nitrogen source Glycine (N) N.D. -0.5 -0.4 +0.0 +0.0
control LB control N.D. -0.6 +0.1 -0.0 -0.2
nitrogen source L-Lysine (N) N.D. -0.6 -0.2 -0.1 +0.1
nitrogen source NAG (N) N.D. -0.8 -0.1 +0.0 +0.1
carbon source D-Galactose (C) N.D. -0.7 -0.0 -0.2 +0.3
stress Fusidic 0.08 mg/ml N.D. -0.7 -0.1 -0.0 +0.2
control LB N.D. -0.8 +0.2 +0.1 -0.0
carbon source L-Phenylalanine (C) N.D. -0.6 -0.1 -0.2 +0.5
stress Vancomycin 0.5 mg/ml N.D. -0.3 -0.1 -0.2 +0.3
carbon source D-Glucosamine Hydrochloride (C) N.D. +0.5 -0.0 +0.3 -0.5
carbon source L-Valine (C) N.D. +0.7 -0.0 -0.3 +0.3
stress Lomefloxacin 0.0004 mM N.D. +2.7 -0.3 +0.0 +0.8
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