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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2093 and PfGW456L13_2094 overlap by 4 nucleotides
PfGW456L13_2094 and PfGW456L13_2095 are separated by 187 nucleotides
PfGW456L13_2095 and PfGW456L13_2096 are separated by 90 nucleotides
PfGW456L13_2096 and PfGW456L13_2097 are separated by 486 nucleotides
PfGW456L13_2093 - Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family, at 2,298,761 to 2,299,744
_2093
PfGW456L13_2094 - CTP:molybdopterin cytidylyltransferase, at 2,299,741 to 2,300,337
_2094
PfGW456L13_2095 - Ribonuclease E (EC 3.1.26.12), at 2,300,525 to 2,303,779
_2095
PfGW456L13_2096 - hypothetical protein, at 2,303,870 to 2,304,004
_2096
PfGW456L13_2097 - Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70), at 2,304,491 to 2,305,453
_2097
Group
Condition
PfGW456L13
_2093
PfGW456L13
_2094
PfGW456L13
_2095
PfGW456L13
_2096
PfGW456L13
_2097
carbon source
D-Gluconic Acid (C)
-0.3
-0.5
-1.8
N.D.
+0.0
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.3
-0.1
-1.1
N.D.
-1.6
carbon source
D-Galactose (C)
-0.3
-0.3
-1.1
N.D.
-0.7
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.1
-0.0
-0.9
N.D.
-1.1
carbon source
L-Asparagine (C)
-0.3
+0.3
-1.7
N.D.
-0.3
control
LB control
-0.2
-0.3
-0.6
N.D.
-0.9
carbon source
D-Fructose (C)
-0.0
+0.4
-2.0
N.D.
-0.0
carbon source
Putrescine (C)
+0.2
-0.7
+0.2
N.D.
-1.2
stress
Vancomycin 0.5 mg/ml
+0.2
+0.3
-1.7
N.D.
-0.3
nitrogen source
Glycine (N)
+0.3
+0.4
-1.5
N.D.
-0.5
stress
A22 0.04 mg/ml
+0.2
-0.3
-0.8
N.D.
-0.4
nitrogen source
Putrescine (N)
+0.2
+0.5
-1.1
N.D.
-0.7
carbon source
D-Lactate (C)
-0.2
-1.2
+0.5
N.D.
-0.2
nitrogen source
Ammonium chloride (N)
+0.3
-0.1
-0.9
N.D.
-0.3
nitrogen source
L-Histidine (N)
+0.1
+0.5
-1.0
N.D.
-0.4
carbon source
D-Alanine (C)
+0.2
+0.5
-1.0
N.D.
-0.5
carbon source
L-Glutamine (C)
+0.1
-0.3
+0.5
N.D.
-1.0
stress
Fusidic 0.08 mg/ml
-0.1
+0.5
-0.3
N.D.
-0.7
carbon source
L-Lactate (C)
+0.3
-1.1
+0.1
N.D.
+0.2
carbon source
a-Ketoglutaric (C)
+0.7
-0.3
+0.8
N.D.
-0.8
carbon source
L-Phenylalanine (C)
+0.2
+0.6
+0.6
N.D.
-0.6
stress
Paraquat dichloride 0.032 mg/ml
+0.1
-0.3
+0.8
N.D.
+0.4
carbon source
D-Serine (C)
-0.2
+0.5
+0.7
N.D.
+0.4
carbon source
L-Tryptophan (C)
+0.2
+0.3
+2.0
N.D.
-1.0
carbon source
D-Serine (C)
+0.2
+0.2
+1.2
N.D.
+0.2
carbon source
L-Tryptophan (C)
-0.1
-0.0
+2.6
N.D.
-0.6
stress
Lomefloxacin 0.0004 mM
-0.1
+0.0
-0.4
N.D.
+2.7
carbon source
L-Valine (C)
+0.3
-0.1
+1.5
N.D.
+0.7
stress
Aluminum chloride 5 mM
+0.2
+0.5
+1.3
N.D.
+0.4
carbon source
octanoate (C)
+0.9
+0.3
+1.3
N.D.
+0.9
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