Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_2084 and PfGW456L13_2085 overlap by 4 nucleotidesPfGW456L13_2085 and PfGW456L13_2086 overlap by 1 nucleotidesPfGW456L13_2086 and PfGW456L13_2087 are separated by 24 nucleotidesPfGW456L13_2087 and PfGW456L13_2088 overlap by 4 nucleotides PfGW456L13_2084 - MotA/TolQ/ExbB proton channel family protein, at 2,291,210 to 2,291,845 _2084 PfGW456L13_2085 - Biopolymer transport protein ExbD/TolR, at 2,291,842 to 2,292,270 _2085 PfGW456L13_2086 - Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130), at 2,292,270 to 2,293,280 _2086 PfGW456L13_2087 - FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster, at 2,293,305 to 2,293,490 _2087 PfGW456L13_2088 - 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38), at 2,293,487 to 2,294,251 _2088
Group Condition PfGW456L13_2084 PfGW456L13_2085 PfGW456L13_2086 PfGW456L13_2087 PfGW456L13_2088
carbon source Trisodium citrate (C) -5.8 N.D. N.D. N.D. N.D.
carbon source D-Galactose (C) -3.6 N.D. N.D. N.D. N.D.
stress Vancomycin 0.5 mg/ml -3.5 N.D. N.D. N.D. N.D.
carbon source D-Galactose (C) -3.3 N.D. N.D. N.D. N.D.
carbon source L-Malic (C) -3.2 N.D. N.D. N.D. N.D.
carbon source octanoate (C) -3.1 N.D. N.D. N.D. N.D.
carbon source Putrescine (C) -2.9 N.D. N.D. N.D. N.D.
stress Lomefloxacin 0.0004 mM -2.7 N.D. N.D. N.D. N.D.
stress Bacitracin 1 mg/ml -2.7 N.D. N.D. N.D. N.D.
carbon source L-Malic (C) -2.4 N.D. N.D. N.D. N.D.
nitrogen source Uridine (N) -2.4 N.D. N.D. N.D. N.D.
carbon source D-Glucosamine Hydrochloride (C) -2.4 N.D. N.D. N.D. N.D.
carbon source D-Gluconic Acid (C) -2.1 N.D. N.D. N.D. N.D.
carbon source Glycerol (C) -2.1 N.D. N.D. N.D. N.D.
stress A22 0.04 mg/ml -2.0 N.D. N.D. N.D. N.D.
carbon source D-Fructose (C) -2.0 N.D. N.D. N.D. N.D.
lb LB -1.8 N.D. N.D. N.D. N.D.
carbon source L-Alanine (C) -1.7 N.D. N.D. N.D. N.D.
carbon source L-Asparagine (C) -1.7 N.D. N.D. N.D. N.D.
nitrogen source NAG (N) -1.7 N.D. N.D. N.D. N.D.
stress Dimethyl Sulfoxide 7.5 vol% -1.7 N.D. N.D. N.D. N.D.
nitrogen source L-Threonine (N) -1.7 N.D. N.D. N.D. N.D.
nitrogen source Gly-Glu (N) -1.7 N.D. N.D. N.D. N.D.
carbon source D-Glucosamine Hydrochloride (C) -1.6 N.D. N.D. N.D. N.D.
stress Vancomycin 0.125 mg/ml -1.6 N.D. N.D. N.D. N.D.
nitrogen source L-Phenylalanine (N) -1.6 N.D. N.D. N.D. N.D.
carbon source D-Alanine (C) -1.6 N.D. N.D. N.D. N.D.
control LB -1.6 N.D. N.D. N.D. N.D.
carbon source L-Arabinose (C) -1.5 N.D. N.D. N.D. N.D.
stress Cephalothin 3 mg/ml -1.5 N.D. N.D. N.D. N.D.
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