Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_2054 and PfGW456L13_2055 are separated by 69 nucleotidesPfGW456L13_2055 and PfGW456L13_2056 are separated by 213 nucleotidesPfGW456L13_2056 and PfGW456L13_2057 are separated by 131 nucleotidesPfGW456L13_2057 and PfGW456L13_2058 are separated by 238 nucleotides PfGW456L13_2054 - Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit, at 2,256,804 to 2,257,610 _2054 PfGW456L13_2055 - Putative membrane protein, at 2,257,680 to 2,258,735 _2055 PfGW456L13_2056 - Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23), at 2,258,949 to 2,259,647 _2056 PfGW456L13_2057 - Putative NADP-dependent oxidoreductase PA1648, at 2,259,779 to 2,260,783 _2057 PfGW456L13_2058 - Short-chain dehydrogenase/reductase SDR, at 2,261,022 to 2,261,783 _2058
Group Condition PfGW456L13_2054 PfGW456L13_2055 PfGW456L13_2056 PfGW456L13_2057 PfGW456L13_2058
carbon source octanoate (C) -0.3 -0.4 N.D. -0.1 -0.1
carbon source L-Glutamine (C) +0.0 -0.7 N.D. -0.2 +0.1
carbon source L-Malic (C) -0.1 -0.3 N.D. -0.2 -0.1
stress Lomefloxacin 0.0004 mM -0.4 -0.2 N.D. -0.1 -0.0
nitrogen source L-Arginine (N) -0.3 -0.2 N.D. +0.0 -0.1
carbon source D-Gluconic Acid (C) -0.2 -0.4 N.D. -0.2 +0.2
carbon source D-Gluconic Acid (C) +0.3 -0.5 N.D. -0.2 -0.1
carbon source L-Histidine (C) +0.2 -0.2 N.D. -0.2 -0.1
carbon source D-Galactose (C) -0.1 -0.2 N.D. -0.2 +0.2
carbon source L-Valine (C) +0.2 -0.3 N.D. -0.2 -0.0
stress Cephalothin 3 mg/ml -0.3 +0.1 N.D. -0.1 +0.1
carbon source D-Alanine (C) +0.3 -0.5 N.D. +0.1 -0.1
carbon source L-Glutamine (C) +0.3 -0.3 N.D. +0.0 -0.1
stress Dimethyl Sulfoxide 7.5 vol% -0.3 +0.2 N.D. -0.0 +0.1
carbon source Putrescine (C) +0.2 -0.1 N.D. -0.2 +0.1
carbon source a-Ketoglutaric (C) +0.5 -0.4 N.D. -0.2 +0.0
carbon source D-Glucosamine Hydrochloride (C) +0.3 -0.3 N.D. -0.1 +0.0
carbon source D-Mannose (C) +0.2 -0.3 N.D. +0.1 +0.1
lb LB -0.3 +0.3 N.D. -0.0 +0.1
carbon source L-Malic (C) +0.3 -0.2 N.D. -0.2 +0.1
nitrogen source nitrate (N) +0.4 +0.0 N.D. -0.1 -0.2
nitrogen source D-Serine (N) +0.4 +0.1 N.D. -0.2 +0.1
carbon source D-Galactose (C) +0.4 -0.2 N.D. -0.0 +0.2
carbon source L-Arabinose (C) +0.2 +0.1 N.D. +0.2 -0.1
carbon source D-Glucose (C) +0.3 -0.0 N.D. +0.3 -0.2
nitrogen source Gly-DL-Asp (N) +0.4 -0.0 N.D. -0.0 +0.2
stress Aluminum chloride 5 mM +0.5 +0.0 N.D. -0.0 +0.2
carbon source succinate (C) +0.5 +0.4 N.D. -0.1 -0.1
carbon source D-Lactate (C) +0.2 +0.2 N.D. +0.4 -0.1
nitrogen source Gly-Glu (N) +0.4 +0.5 N.D. -0.0 -0.1
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