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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_2024 and PfGW456L13_2025 are separated by 114 nucleotides
PfGW456L13_2025 and PfGW456L13_2026 are separated by 89 nucleotides
PfGW456L13_2026 and PfGW456L13_2027 overlap by 1 nucleotides
PfGW456L13_2027 and PfGW456L13_2028 are separated by 77 nucleotides
PfGW456L13_2024 - Arsenate reductase (EC 1.20.4.1), at 2,226,746 to 2,227,099
_2024
PfGW456L13_2025 - Cytochrome c-type biogenesis protein ResA, at 2,227,214 to 2,227,681
_2025
PfGW456L13_2026 - Heat shock protein, at 2,227,771 to 2,228,175
_2026
PfGW456L13_2027 - FIG00953240: hypothetical protein, at 2,228,175 to 2,228,609
_2027
PfGW456L13_2028 - D-lactate dehydrogenase (EC 1.1.1.28), at 2,228,687 to 2,229,679
_2028
Group
Condition
PfGW456L13
_2024
PfGW456L13
_2025
PfGW456L13
_2026
PfGW456L13
_2027
PfGW456L13
_2028
stress
Aluminum chloride 5 mM
-0.3
-1.1
-0.2
N.D.
-0.3
stress
Cephalothin 3 mg/ml
-0.5
-1.5
+0.0
N.D.
+0.1
carbon source
D-Lactate (C)
-0.5
-0.6
-0.4
N.D.
-0.3
stress
Nickel (II) chloride 1 mM
-0.0
-1.6
+0.0
N.D.
+0.1
carbon source
D-Fructose (C)
-0.8
-0.2
-0.3
N.D.
-0.2
carbon source
L-Malic (C)
-0.9
-0.1
-0.4
N.D.
+0.0
control
LB control
-0.2
-0.7
+0.3
N.D.
-0.7
carbon source
octanoate (C)
-0.4
+0.2
-0.3
N.D.
-0.7
stress
Vancomycin 0.5 mg/ml
+0.1
-1.2
+0.2
N.D.
-0.2
carbon source
D-Alanine (C)
-0.7
+0.1
-0.2
N.D.
-0.2
stress
D-Cycloserine 0.125 mg/ml
-0.5
-0.7
+0.2
N.D.
+0.0
carbon source
a-Ketoglutaric (C)
-0.4
+0.5
-1.3
N.D.
+0.3
stress
Vancomycin 0.25 mg/ml
+0.2
-1.1
+0.3
N.D.
-0.3
stress
Aluminum chloride 2.5 mM
+0.2
-1.1
+0.1
N.D.
+0.2
carbon source
L-Valine (C)
-0.8
+0.7
-0.6
N.D.
+0.0
carbon source
D-Galactose (C)
+0.4
+0.1
-0.6
N.D.
-0.5
stress
Zinc 1 mM
+0.5
-1.0
-0.0
N.D.
+0.1
control
LB control
-0.4
+0.6
+0.3
N.D.
-0.8
carbon source
L-Alanine (C)
+0.2
+0.5
-0.4
N.D.
-0.2
carbon source
D-Gluconic Acid (C)
-0.1
+0.7
-0.6
N.D.
+0.1
carbon source
D-Glucosamine Hydrochloride (C)
+0.4
+0.4
-0.4
N.D.
-0.1
carbon source
D-Serine (C)
-0.5
+0.4
+0.2
N.D.
+0.1
nitrogen source
D-Serine (N)
-0.9
+0.8
+0.3
N.D.
+0.2
carbon source
L-Tryptophan (C)
+0.3
+0.8
-0.0
N.D.
-0.4
nitrogen source
L-Serine (N)
-0.2
+0.5
+0.2
N.D.
+0.3
carbon source
D-Gluconic Acid (C)
+0.5
-0.3
+0.3
N.D.
+0.3
carbon source
D-Lactate (C)
-0.2
+0.3
+0.3
N.D.
+0.6
nitrogen source
Uridine (N)
+0.3
+0.1
+0.3
N.D.
+0.5
nitrogen source
L-Threonine (N)
+0.4
+0.5
+0.4
N.D.
-0.1
nitrogen source
L-Isoleucine (N)
+0.1
+0.6
+0.3
N.D.
+0.5
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