Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 116 experiments or choose conditions or try the comparative fitness browser

500 ntPfGW456L13_2024 and PfGW456L13_2025 are separated by 114 nucleotidesPfGW456L13_2025 and PfGW456L13_2026 are separated by 89 nucleotidesPfGW456L13_2026 and PfGW456L13_2027 overlap by 1 nucleotidesPfGW456L13_2027 and PfGW456L13_2028 are separated by 77 nucleotides PfGW456L13_2024 - Arsenate reductase (EC 1.20.4.1), at 2,226,746 to 2,227,099 _2024 PfGW456L13_2025 - Cytochrome c-type biogenesis protein ResA, at 2,227,214 to 2,227,681 _2025 PfGW456L13_2026 - Heat shock protein, at 2,227,771 to 2,228,175 _2026 PfGW456L13_2027 - FIG00953240: hypothetical protein, at 2,228,175 to 2,228,609 _2027 PfGW456L13_2028 - D-lactate dehydrogenase (EC 1.1.1.28), at 2,228,687 to 2,229,679 _2028
Group Condition PfGW456L13_2024 PfGW456L13_2025 PfGW456L13_2026 PfGW456L13_2027 PfGW456L13_2028
stress Aluminum chloride 5 mM -0.3 -1.1 -0.2 N.D. -0.3
stress Cephalothin 3 mg/ml -0.5 -1.5 +0.0 N.D. +0.1
carbon source D-Lactate (C) -0.5 -0.6 -0.4 N.D. -0.3
stress Nickel (II) chloride 1 mM -0.0 -1.6 +0.0 N.D. +0.1
carbon source D-Fructose (C) -0.8 -0.2 -0.3 N.D. -0.2
carbon source L-Malic (C) -0.9 -0.1 -0.4 N.D. +0.0
control LB control -0.2 -0.7 +0.3 N.D. -0.7
carbon source octanoate (C) -0.4 +0.2 -0.3 N.D. -0.7
stress Vancomycin 0.5 mg/ml +0.1 -1.2 +0.2 N.D. -0.2
carbon source D-Alanine (C) -0.7 +0.1 -0.2 N.D. -0.2
stress D-Cycloserine 0.125 mg/ml -0.5 -0.7 +0.2 N.D. +0.0
carbon source a-Ketoglutaric (C) -0.4 +0.5 -1.3 N.D. +0.3
stress Vancomycin 0.25 mg/ml +0.2 -1.1 +0.3 N.D. -0.3
stress Aluminum chloride 2.5 mM +0.2 -1.1 +0.1 N.D. +0.2
carbon source L-Valine (C) -0.8 +0.7 -0.6 N.D. +0.0
carbon source D-Galactose (C) +0.4 +0.1 -0.6 N.D. -0.5
stress Zinc 1 mM +0.5 -1.0 -0.0 N.D. +0.1
control LB control -0.4 +0.6 +0.3 N.D. -0.8
carbon source L-Alanine (C) +0.2 +0.5 -0.4 N.D. -0.2
carbon source D-Gluconic Acid (C) -0.1 +0.7 -0.6 N.D. +0.1
carbon source D-Glucosamine Hydrochloride (C) +0.4 +0.4 -0.4 N.D. -0.1
carbon source D-Serine (C) -0.5 +0.4 +0.2 N.D. +0.1
nitrogen source D-Serine (N) -0.9 +0.8 +0.3 N.D. +0.2
carbon source L-Tryptophan (C) +0.3 +0.8 -0.0 N.D. -0.4
nitrogen source L-Serine (N) -0.2 +0.5 +0.2 N.D. +0.3
carbon source D-Gluconic Acid (C) +0.5 -0.3 +0.3 N.D. +0.3
carbon source D-Lactate (C) -0.2 +0.3 +0.3 N.D. +0.6
nitrogen source Uridine (N) +0.3 +0.1 +0.3 N.D. +0.5
nitrogen source L-Threonine (N) +0.4 +0.5 +0.4 N.D. -0.1
nitrogen source L-Isoleucine (N) +0.1 +0.6 +0.3 N.D. +0.5
remove
PfGW456L13_2024
plot
remove
PfGW456L13_2025
plot
remove
PfGW456L13_2026
remove
PfGW456L13_2027
plot
remove
PfGW456L13_2028
plot