Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_1958 and PfGW456L13_1959 are separated by 83 nucleotidesPfGW456L13_1959 and PfGW456L13_1960 are separated by 292 nucleotidesPfGW456L13_1960 and PfGW456L13_1961 are separated by 527 nucleotidesPfGW456L13_1961 and PfGW456L13_1962 are separated by 190 nucleotides PfGW456L13_1958 - Endonuclease, at 2,153,559 to 2,156,180 _1958 PfGW456L13_1959 - DNA-cytosine methyltransferase (EC 2.1.1.37), at 2,156,264 to 2,157,823 _1959 PfGW456L13_1960 - Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1), at 2,158,116 to 2,159,363 _1960 PfGW456L13_1961 - Conserved domain protein precursor, at 2,159,891 to 2,160,244 _1961 PfGW456L13_1962 - Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit, at 2,160,435 to 2,160,698 _1962
Group Condition PfGW456L13_1958 PfGW456L13_1959 PfGW456L13_1960 PfGW456L13_1961 PfGW456L13_1962
carbon source a-Ketoglutaric (C) -0.6 N.D. N.D. -0.9 +0.0
carbon source succinate (C) -0.2 N.D. N.D. -0.8 -0.2
carbon source L-Histidine (C) -0.1 N.D. N.D. -0.8 -0.1
control LB control -0.1 N.D. N.D. -0.8 -0.1
carbon source L-Lactate (C) -0.1 N.D. N.D. -0.8 +0.3
carbon source D-Lactate (C) -0.3 N.D. N.D. +0.2 -0.3
carbon source D-Gluconic Acid (C) -0.4 N.D. N.D. +0.4 -0.0
nitrogen source L-Asparagine (N) -0.2 N.D. N.D. +0.6 -0.1
carbon source octanoate (C) -0.6 N.D. N.D. +0.8 +0.1
carbon source D-Galactose (C) +0.6 N.D. N.D. -0.3 +0.1
carbon source D-Glucose (C) +0.0 N.D. N.D. +0.8 -0.4
carbon source L-Glutamine (C) -0.1 N.D. N.D. +0.9 -0.5
stress Lomefloxacin 0.0004 mM -0.4 N.D. N.D. +0.8 +0.1
nitrogen source L-Serine (N) -0.2 N.D. N.D. +0.9 -0.2
nitrogen source L-Proline (N) +0.2 N.D. N.D. +0.6 -0.2
nitrogen source Gly-DL-Asp (N) -0.2 N.D. N.D. +0.9 -0.0
nitrogen source L-Lysine (N) +0.1 N.D. N.D. +0.6 -0.1
nitrogen source L-Citrulline (N) +0.0 N.D. N.D. +0.8 -0.1
nitrogen source D-Alanine (N) +0.0 N.D. N.D. +0.8 -0.1
nitrogen source nitrate (N) -0.0 N.D. N.D. +0.7 +0.0
nitrogen source L-Threonine (N) -0.0 N.D. N.D. +1.0 -0.2
stress Vancomycin 0.25 mg/ml +0.1 N.D. N.D. +0.6 +0.1
stress nitrite 5 mM -0.1 N.D. N.D. +0.7 +0.1
carbon source D-Serine (C) +0.2 N.D. N.D. +0.4 +0.1
nitrogen source Gly-Glu (N) -0.1 N.D. N.D. +1.1 +0.0
stress Thallium(I) acetate 0.002 mg/ml -0.0 N.D. N.D. +0.8 +0.3
carbon source Glycerol (C) +0.1 N.D. N.D. +0.9 +0.1
carbon source L-Arabinose (C) +0.1 N.D. N.D. +1.1 +0.1
carbon source Trisodium citrate (C) +0.4 N.D. N.D. +1.0 -0.0
stress Vancomycin 0.5 mg/ml +0.1 N.D. N.D. +1.0 +0.5
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