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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_1942 and PfGW456L13_1943 are separated by 60 nucleotides
PfGW456L13_1943 and PfGW456L13_1944 are separated by 208 nucleotides
PfGW456L13_1944 and PfGW456L13_1945 are separated by 211 nucleotides
PfGW456L13_1945 and PfGW456L13_1946 are separated by 145 nucleotides
PfGW456L13_1942 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 2,132,437 to 2,134,062
_1942
PfGW456L13_1943 - FIG00955597: hypothetical protein, at 2,134,123 to 2,134,428
_1943
PfGW456L13_1944 - Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46), at 2,134,637 to 2,135,761
_1944
PfGW456L13_1945 - FIG00964654: hypothetical protein, at 2,135,973 to 2,136,299
_1945
PfGW456L13_1946 - FIG00959431: hypothetical protein, at 2,136,445 to 2,136,768
_1946
Group
Condition
PfGW456L13
_1942
PfGW456L13
_1943
PfGW456L13
_1944
PfGW456L13
_1945
PfGW456L13
_1946
carbon source
a-Ketoglutaric (C)
-0.4
N.D.
-0.6
+0.0
N.D.
carbon source
L-Glutamine (C)
-0.3
N.D.
-0.4
-0.1
N.D.
nitrogen source
Gly-DL-Asp (N)
-0.3
N.D.
-0.2
-0.2
N.D.
stress
Vancomycin 0.25 mg/ml
-0.5
N.D.
-0.2
-0.0
N.D.
stress
Nickel (II) chloride 1 mM
-0.2
N.D.
-0.2
-0.2
N.D.
nitrogen source
L-Glutamic (N)
-0.2
N.D.
-0.4
+0.1
N.D.
stress
Aluminum chloride 5 mM
-0.3
N.D.
+0.3
-0.5
N.D.
nitrogen source
Gly-Glu (N)
+0.2
N.D.
-0.4
-0.3
N.D.
carbon source
D-Fructose (C)
-0.6
N.D.
+0.2
-0.1
N.D.
carbon source
L-Tryptophan (C)
-0.1
N.D.
+0.2
-0.4
N.D.
stress
Paraquat dichloride 0.032 mg/ml
-0.2
N.D.
+0.2
-0.3
N.D.
stress
Aluminum chloride 2.5 mM
+0.0
N.D.
+0.5
-0.7
N.D.
nitrogen source
L-Asparagine (N)
-0.4
N.D.
+0.1
+0.2
N.D.
nitrogen source
L-Aspartic Acid (N)
-0.4
N.D.
+0.2
+0.1
N.D.
carbon source
L-Lactate (C)
+0.3
N.D.
-0.3
-0.1
N.D.
carbon source
D-Galactose (C)
-0.4
N.D.
+0.3
+0.1
N.D.
lb
LB
-0.1
N.D.
+0.4
-0.2
N.D.
carbon source
Glycerol (C)
-0.2
N.D.
+0.1
+0.4
N.D.
carbon source
succinate (C)
+0.5
N.D.
+0.1
-0.2
N.D.
carbon source
L-Asparagine (C)
-0.1
N.D.
+0.2
+0.3
N.D.
carbon source
Tween 20 (C)
+0.2
N.D.
+0.4
-0.1
N.D.
carbon source
Trisodium citrate (C)
+0.3
N.D.
-0.2
+0.3
N.D.
carbon source
D-Glucose (C)
+0.6
N.D.
-0.2
+0.0
N.D.
carbon source
L-Malic (C)
+0.2
N.D.
-0.1
+0.4
N.D.
carbon source
L-Tryptophan (C)
-0.1
N.D.
+0.2
+0.4
N.D.
carbon source
D-Lactate (C)
+0.5
N.D.
-0.1
+0.1
N.D.
stress
Lomefloxacin 0.0004 mM
+0.3
N.D.
+0.3
+0.1
N.D.
carbon source
D-Mannose (C)
+0.3
N.D.
+0.2
+0.3
N.D.
carbon source
L-Phenylalanine (C)
+0.3
N.D.
+0.3
+0.2
N.D.
carbon source
Putrescine (C)
+0.6
N.D.
-0.1
+0.5
N.D.
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