Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_1936 and PfGW456L13_1937 are separated by 204 nucleotidesPfGW456L13_1937 and PfGW456L13_1938 are separated by 90 nucleotidesPfGW456L13_1938 and PfGW456L13_1939 are separated by 124 nucleotidesPfGW456L13_1939 and PfGW456L13_1940 overlap by 4 nucleotides PfGW456L13_1936 - RNA polymerase sigma-70 factor, ECF subfamily, at 2,127,057 to 2,127,497 _1936 PfGW456L13_1937 - LysR-family transcriptional regulator STM3020, at 2,127,702 to 2,128,556 _1937 PfGW456L13_1938 - FIG00961830: hypothetical protein, at 2,128,647 to 2,129,081 _1938 PfGW456L13_1939 - dTDP-6-deoxy-L-hexose 3-O-methyltransferase, at 2,129,206 to 2,129,928 _1939 PfGW456L13_1940 - hypothetical protein, at 2,129,925 to 2,130,791 _1940
Group Condition PfGW456L13_1936 PfGW456L13_1937 PfGW456L13_1938 PfGW456L13_1939 PfGW456L13_1940
carbon source L-Lactate (C) -4.1 -0.2 +0.1 +0.0 +0.0
carbon source Putrescine (C) -3.9 -0.1 -0.2 +0.1 +0.5
stress Vancomycin 0.25 mg/ml -1.4 -0.1 -0.0 -0.1 -0.2
carbon source D-Galactose (C) -0.9 -0.2 -0.1 -0.1 -0.5
carbon source L-Phenylalanine (C) -0.8 -0.4 -0.2 -0.0 -0.2
carbon source L-Glutamine (C) -1.8 +0.3 -0.1 +0.1 -0.0
carbon source L-Valine (C) -0.9 +0.0 +0.0 -0.1 -0.4
carbon source D-Lactate (C) -1.3 -0.1 +0.3 +0.1 -0.3
carbon source D-Alanine (C) -1.6 +0.1 +0.1 +0.2 -0.1
carbon source Glycerol (C) -1.7 +0.2 +0.3 -0.3 +0.1
nitrogen source L-Lysine (N) -1.0 +0.0 +0.1 -0.2 -0.0
carbon source L-Tryptophan (C) -1.4 +0.1 +0.1 -0.1 +0.2
carbon source D,L-Lactate (C) +0.3 -0.4 -0.1 -0.4 -0.5
stress Chloride 400 mM -0.9 -0.2 -0.1 +0.2 -0.1
stress nitrite 10 mM -1.3 -0.1 +0.1 +0.1 +0.1
carbon source L-Asparagine (C) -0.9 -0.1 +0.3 +0.0 -0.3
nitrogen source Cytosine (N) -1.1 +0.1 -0.1 +0.0 +0.1
carbon source casaminos (C) -1.0 -0.2 -0.0 +0.0 +0.3
stress Fusidic 0.08 mg/ml -0.6 +0.2 -0.1 +0.1 -0.4
stress D-Cycloserine 0.125 mg/ml -0.9 -0.0 +0.1 -0.3 +0.3
carbon source D-Mannose (C) -0.7 +0.3 +0.1 -0.1 -0.3
carbon source a-Ketoglutaric (C) +0.9 -0.2 -0.1 -0.2 -0.5
carbon source succinate (C) +0.7 +0.2 -0.4 +0.1 -0.3
carbon source a-Ketoglutaric (C) -0.2 -0.3 +0.2 +0.3 +0.4
carbon source D-Fructose (C) +0.9 +0.0 -0.2 +0.3 -0.4
carbon source L-Malic (C) +0.8 +0.4 -0.1 +0.0 -0.3
carbon source D-Galactose (C) -0.3 +0.5 +0.4 -0.1 +0.4
carbon source D-Glucosamine Hydrochloride (C) +0.7 +0.4 -0.0 +0.0 -0.2
nitrogen source Ammonium chloride (N) +0.6 +0.2 +0.1 +0.3 -0.2
control LB control +1.0 +0.0 +0.1 +0.0 +0.2
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