Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_1871 and PfGW456L13_1872 are separated by 63 nucleotidesPfGW456L13_1872 and PfGW456L13_1873 are separated by 184 nucleotidesPfGW456L13_1873 and PfGW456L13_1874 are separated by 81 nucleotidesPfGW456L13_1874 and PfGW456L13_1875 are separated by 34 nucleotides PfGW456L13_1871 - Acetyl-CoA carboxylase alpha subunit, at 2,059,242 to 2,059,604 _1871 PfGW456L13_1872 - Carbamate kinase (EC 2.7.2.2), at 2,059,668 to 2,060,597 _1872 PfGW456L13_1873 - Ornithine carbamoyltransferase (EC 2.1.3.3), at 2,060,782 to 2,061,792 _1873 PfGW456L13_1874 - Arginine deiminase (EC 3.5.3.6), at 2,061,874 to 2,063,130 _1874 PfGW456L13_1875 - Arginine/ornithine antiporter ArcD, at 2,063,165 to 2,064,592 _1875
Group Condition PfGW456L13_1871 PfGW456L13_1872 PfGW456L13_1873 PfGW456L13_1874 PfGW456L13_1875
control LB control -0.2 -0.0 -0.2 -0.1 -0.9
control LB control -0.1 -0.1 -0.2 -0.1 -0.9
control LB control -0.3 -0.1 -0.1 -0.1 -0.8
control LB control +0.0 -0.1 -0.0 -0.3 -0.8
lb LB -0.2 +0.1 -0.2 -0.4 -0.2
carbon source D-Fructose (C) -0.4 -0.0 -0.1 -0.2 -0.1
carbon source L-Glutamine (C) +0.1 -0.3 -0.1 -0.1 -0.3
nitrogen source NAG (N) -0.4 -0.0 -0.1 -0.3 +0.0
carbon source L-Alanine (C) -0.1 +0.1 -0.1 -0.4 -0.1
stress nitrate 200 mM -0.2 -0.0 +0.1 -0.3 -0.1
carbon source L-Malic (C) -0.3 +0.0 -0.1 +0.3 -0.4
carbon source D-Lactate (C) -0.7 -0.0 -0.0 +0.1 +0.1
carbon source L-Malic (C) -0.1 +0.0 +0.1 -0.3 -0.2
carbon source L-Arabinose (C) -0.2 -0.3 +0.1 +0.2 -0.0
carbon source D-Galactose (C) -0.0 -0.2 +0.3 -0.2 +0.1
nitrogen source L-Glutamic (N) +0.1 -0.1 +0.0 -0.4 +0.2
carbon source octanoate (C) -0.6 -0.4 +0.3 +0.2 +0.3
stress Aluminum chloride 5 mM +0.2 -0.3 -0.2 -0.1 +0.2
carbon source L-Phenylalanine (C) -0.1 -0.3 +0.2 +0.0 +0.1
stress Lomefloxacin 0.0004 mM -0.2 +0.1 +0.0 +0.4 -0.2
stress Bacitracin 1 mg/ml -0.4 +0.0 +0.1 +0.3 +0.2
carbon source D-Glucose (C) +0.3 -0.2 +0.1 +0.1 +0.1
carbon source D-Gluconic Acid (C) +0.3 +0.1 +0.1 +0.3 -0.4
carbon source D,L-Lactate (C) -0.2 +0.2 +0.1 +0.1 +0.3
carbon source a-Ketoglutaric (C) +0.5 +0.3 -0.1 +0.0 -0.2
carbon source succinate (C) +0.3 +0.2 +0.3 -0.1 -0.2
carbon source L-Tryptophan (C) +0.1 -0.1 +0.3 -0.0 +0.3
stress Fusidic 0.03 mg/ml +0.2 +0.1 +0.2 +0.2 +0.1
nitrogen source D-Serine (N) -0.0 -0.0 +0.3 +0.3 +0.4
stress Fusidic 0.08 mg/ml +0.2 +0.4 +0.5 +0.3 +0.2
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