Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_185 and PfGW456L13_186 are separated by 33 nucleotidesPfGW456L13_186 and PfGW456L13_187 overlap by 13 nucleotidesPfGW456L13_187 and PfGW456L13_188 are separated by 476 nucleotidesPfGW456L13_188 and PfGW456L13_189 are separated by 121 nucleotides PfGW456L13_185 - Predicted hydroxymethylpyrimidine transporter CytX, at 209,985 to 211,277 _185 PfGW456L13_186 - hypothetical protein, at 211,311 to 211,442 _186 PfGW456L13_187 - Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17), at 211,430 to 213,319 _187 PfGW456L13_188 - Type I secretion outer membrane protein, TolC precursor, at 213,796 to 215,235 _188 PfGW456L13_189 - 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-), at 215,357 to 216,649 _189
Group Condition PfGW456L13_185 PfGW456L13_186 PfGW456L13_187 PfGW456L13_188 PfGW456L13_189
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x +0.3 N.D. -2.2 -0.3 N.D.
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x +0.4 N.D. -1.6 -0.3 N.D.
carbon source L-Arabinose (C) -1.5 N.D. -0.1 +0.0 N.D.
carbon source D-Galactose (C) -0.6 N.D. -0.1 -0.1 N.D.
carbon source octanoate (C) -0.6 N.D. -0.0 -0.1 N.D.
carbon source a-Ketoglutaric (C) -0.7 N.D. +0.1 -0.0 N.D.
nitrogen source L-Leucine (N) -0.4 N.D. -0.1 -0.1 N.D.
carbon source D-Glucosamine Hydrochloride (C) -0.6 N.D. -0.0 +0.0 N.D.
carbon source D-Fructose (C) -0.8 N.D. +0.1 +0.1 N.D.
nitrogen source L-Phenylalanine (N) -0.6 N.D. -0.0 +0.1 N.D.
nitrogen source L-Isoleucine (N) -0.4 N.D. +0.0 -0.2 N.D.
carbon source Trisodium citrate (C) -0.6 N.D. -0.2 +0.2 N.D.
stress Thallium(I) acetate 0.008 mg/ml -0.4 N.D. -0.1 +0.1 N.D.
stress D-Cycloserine 0.125 mg/ml -0.3 N.D. +0.1 -0.2 N.D.
carbon source D-Glucose (C) -0.4 N.D. +0.1 -0.1 N.D.
nitrogen source nitrate (N) -0.4 N.D. +0.1 -0.1 N.D.
carbon source a-Ketoglutaric (C) +0.3 N.D. -0.0 -0.2 N.D.
carbon source D-Gluconic Acid (C) -0.3 N.D. +0.3 +0.0 N.D.
stress Lomefloxacin 0.0004 mM +0.4 N.D. -0.2 -0.1 N.D.
carbon source L-Malic (C) +0.5 N.D. +0.0 -0.1 N.D.
nitrogen source L-Tryptophan (N) +0.5 N.D. -0.0 -0.0 N.D.
carbon source D-Lactate (C) +0.7 N.D. -0.1 -0.1 N.D.
carbon source D-Gluconic Acid (C) +0.3 N.D. +0.3 -0.0 N.D.
nitrogen source L-Histidine (N) +0.4 N.D. +0.0 +0.1 N.D.
nitrogen source Putrescine (N) +0.6 N.D. +0.1 -0.0 N.D.
carbon source Tween 20 (C) +0.3 N.D. +0.2 +0.2 N.D.
carbon source D-Mannose (C) +0.6 N.D. +0.1 +0.1 N.D.
carbon source D-Lactate (C) +0.6 N.D. +0.1 +0.1 N.D.
carbon source D-Fructose (C) +0.4 N.D. +0.1 +0.4 N.D.
carbon source D-Galactose (C) +1.0 N.D. +0.1 +0.1 N.D.
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