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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_1805 and PfGW456L13_1806 are separated by 298 nucleotides
PfGW456L13_1806 and PfGW456L13_1807 overlap by 7 nucleotides
PfGW456L13_1807 and PfGW456L13_1808 are separated by 228 nucleotides
PfGW456L13_1808 and PfGW456L13_1809 are separated by 42 nucleotides
PfGW456L13_1805 - Dicarboxylate MFS transporter, at 1,986,019 to 1,987,338
_1805
PfGW456L13_1806 - Nitrogen regulation protein NR(I), at 1,987,637 to 1,988,971
_1806
PfGW456L13_1807 - C4-dicarboxylate transport sensor protein, at 1,988,965 to 1,990,731
_1807
PfGW456L13_1808 - Fumarate hydratase class I, aerobic (EC 4.2.1.2), at 1,990,960 to 1,992,483
_1808
PfGW456L13_1809 - hypothetical protein, at 1,992,526 to 1,992,927
_1809
Group
Condition
PfGW456L13
_1805
PfGW456L13
_1806
PfGW456L13
_1807
PfGW456L13
_1808
PfGW456L13
_1809
carbon source
a-Ketoglutaric (C)
-3.9
-4.8
-4.5
N.D.
-0.0
carbon source
a-Ketoglutaric (C)
-2.8
-4.4
-2.7
N.D.
-0.0
carbon source
succinate (C)
-0.3
-0.3
-0.1
N.D.
+0.1
carbon source
Putrescine (C)
+0.2
-0.3
-0.1
N.D.
-0.5
nitrogen source
L-Citrulline (N)
-0.2
-0.1
-0.2
N.D.
-0.1
nitrogen source
L-Histidine (N)
-0.1
-0.4
-0.1
N.D.
+0.1
carbon source
D-Fructose (C)
-0.1
+0.4
-0.1
N.D.
-0.5
stress
Bacitracin 1 mg/ml
+0.2
-0.5
+0.1
N.D.
+0.0
nitrogen source
L-Tryptophan (N)
-0.1
-0.4
+0.2
N.D.
+0.1
carbon source
D-Serine (C)
-0.1
-0.3
+0.1
N.D.
+0.2
carbon source
L-Malic (C)
+0.1
-0.3
+0.3
N.D.
-0.1
carbon source
D-Glucose (C)
-0.0
+0.4
-0.3
N.D.
-0.1
carbon source
L-Glutamine (C)
-0.1
-0.2
-0.1
N.D.
+0.3
carbon source
D-Gluconic Acid (C)
-0.1
+0.3
+0.2
N.D.
-0.4
nitrogen source
Ammonium chloride (N)
+0.1
-0.4
+0.1
N.D.
+0.2
stress
Vancomycin 0.25 mg/ml
+0.1
-0.3
+0.2
N.D.
+0.1
stress
Cephalothin 3 mg/ml
+0.2
-0.2
+0.2
N.D.
-0.0
stress
Vancomycin 0.125 mg/ml
+0.1
-0.3
+0.1
N.D.
+0.3
stress
Dimethyl Sulfoxide 7.5 vol%
-0.0
-0.2
+0.2
N.D.
+0.2
carbon source
L-Lactate (C)
-0.1
-0.3
-0.0
N.D.
+0.7
nitrogen source
Gly-DL-Asp (N)
+0.1
-0.2
-0.0
N.D.
+0.5
carbon source
L-Phenylalanine (C)
-0.1
+0.3
-0.1
N.D.
+0.3
stress
Vancomycin 0.5 mg/ml
+0.2
-0.2
+0.2
N.D.
+0.2
carbon source
L-Asparagine (C)
-0.1
+0.2
+0.1
N.D.
+0.3
carbon source
Trisodium citrate (C)
-0.0
+0.0
-0.0
N.D.
+0.6
nitrogen source
L-Valine (N)
+0.2
+0.2
+0.1
N.D.
+0.2
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.1
+0.2
+0.2
N.D.
+0.2
carbon source
D-Mannose (C)
+0.0
+0.3
+0.1
N.D.
+0.3
carbon source
L-Tryptophan (C)
-0.1
+0.5
+0.2
N.D.
+0.1
carbon source
L-Arabinose (C)
-0.0
+0.2
+0.4
N.D.
+0.4
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