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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_1781 and PfGW456L13_1782 are separated by 96 nucleotides
PfGW456L13_1782 and PfGW456L13_1783 are separated by 54 nucleotides
PfGW456L13_1783 and PfGW456L13_1784 are separated by 116 nucleotides
PfGW456L13_1784 and PfGW456L13_1785 are separated by 231 nucleotides
PfGW456L13_1781 - FIG00953860: hypothetical protein, at 1,962,155 to 1,962,556
_1781
PfGW456L13_1782 - Chromosome initiation inhibitor, at 1,962,653 to 1,963,546
_1782
PfGW456L13_1783 - Nucleoside-diphosphate-sugar epimerases, at 1,963,601 to 1,964,593
_1783
PfGW456L13_1784 - Glutamate synthase [NADPH] large chain (EC 1.4.1.13), at 1,964,710 to 1,965,582
_1784
PfGW456L13_1785 - Cytochrome c, at 1,965,814 to 1,966,662
_1785
Group
Condition
PfGW456L13
_1781
PfGW456L13
_1782
PfGW456L13
_1783
PfGW456L13
_1784
PfGW456L13
_1785
carbon source
D-Gluconic Acid (C)
-0.6
+0.6
+0.2
-3.6
-0.0
carbon source
D-Fructose (C)
-0.5
+0.1
-0.3
-1.6
-0.1
control
LB control
-0.1
+0.1
+0.1
-2.0
+0.1
carbon source
D-Lactate (C)
-0.3
+0.1
-0.3
-1.2
+0.0
stress
Benzethonium chloride 0.0125 mM
-0.1
+0.0
-0.1
-1.4
+0.1
control
LB control
-0.0
-0.2
+0.0
-1.3
+0.1
carbon source
D-Alanine (C)
-0.3
+0.3
+0.1
-1.3
-0.0
carbon source
D-Alanine (C)
+0.0
+0.0
+0.2
-1.6
+0.0
carbon source
Glycerol (C)
+0.1
-0.0
+0.2
-1.6
+0.1
carbon source
L-Arabinose (C)
+0.2
-0.0
+0.2
-1.3
-0.0
carbon source
a-Ketoglutaric (C)
-0.5
-0.1
+0.1
-0.5
+0.1
carbon source
D-Glucosamine Hydrochloride (C)
+0.1
+0.1
-0.1
-0.8
-0.2
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.1
+0.2
+0.0
-1.1
-0.0
carbon source
D-Fructose (C)
-0.1
+0.5
-0.4
-1.0
+0.1
carbon source
D-Mannose (C)
+0.1
+0.0
+0.1
-1.0
-0.1
carbon source
L-Malic (C)
-0.3
-0.1
+0.1
-0.7
+0.1
nitrogen source
L-Lysine (N)
-0.2
-0.4
+0.1
-0.5
+0.1
control
LB control
-0.1
+0.1
-0.1
-0.8
+0.1
stress
Lomefloxacin 0.0004 mM
-0.2
+0.2
+0.2
-0.9
+0.0
carbon source
D-Lactate (C)
+0.2
+0.2
+0.1
-1.1
-0.1
stress
Chloride 400 mM
+0.1
+0.1
+0.1
-1.0
+0.1
nitrogen source
D-Serine (N)
-0.0
+0.1
+0.1
-0.9
+0.2
carbon source
Trisodium citrate (C)
-0.0
-0.5
+0.2
+0.4
-0.3
carbon source
D-Galactose (C)
-0.3
-0.0
+0.4
+0.5
-0.3
carbon source
succinate (C)
-0.1
+0.1
+0.0
+0.6
-0.4
carbon source
Glycerol (C)
+0.2
+0.1
-0.1
+0.5
-0.5
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.1
+0.1
-0.2
+0.9
-0.1
carbon source
a-Ketoglutaric (C)
+0.5
+0.3
+0.5
-0.9
+0.2
nitrogen source
L-Serine (N)
-0.2
-0.1
-0.0
+0.9
+0.1
carbon source
L-Lactate (C)
+0.4
+0.1
+0.2
+0.3
-0.2
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