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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_1778 and PfGW456L13_1779 are separated by 180 nucleotides
PfGW456L13_1779 and PfGW456L13_1780 are separated by 164 nucleotides
PfGW456L13_1780 and PfGW456L13_1781 are separated by 6 nucleotides
PfGW456L13_1781 and PfGW456L13_1782 are separated by 96 nucleotides
PfGW456L13_1778 - hypothetical protein, at 1,960,422 to 1,960,604
_1778
PfGW456L13_1779 - Superoxide dismutase [Fe] (EC 1.15.1.1), at 1,960,785 to 1,961,381
_1779
PfGW456L13_1780 - Transporter, LysE family, at 1,961,546 to 1,962,148
_1780
PfGW456L13_1781 - FIG00953860: hypothetical protein, at 1,962,155 to 1,962,556
_1781
PfGW456L13_1782 - Chromosome initiation inhibitor, at 1,962,653 to 1,963,546
_1782
Group
Condition
PfGW456L13
_1778
PfGW456L13
_1779
PfGW456L13
_1780
PfGW456L13
_1781
PfGW456L13
_1782
carbon source
D-Fructose (C)
N.D.
N.D.
-0.4
-0.5
+0.1
carbon source
octanoate (C)
N.D.
N.D.
-0.6
-0.0
-0.1
carbon source
L-Valine (C)
N.D.
N.D.
-0.1
-0.4
-0.2
nitrogen source
L-Lysine (N)
N.D.
N.D.
-0.1
-0.2
-0.4
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
-0.0
-0.5
-0.1
carbon source
D-Glucose (C)
N.D.
N.D.
-0.4
-0.0
-0.1
stress
Zinc 1 mM
N.D.
N.D.
-0.1
-0.3
-0.1
carbon source
L-Arabinose (C)
N.D.
N.D.
-0.6
+0.2
-0.0
stress
Cephalothin 3 mg/ml
N.D.
N.D.
-0.2
-0.2
-0.0
stress
Lomefloxacin 0.0004 mM
N.D.
N.D.
-0.4
-0.2
+0.2
stress
Paraquat dichloride 0.032 mg/ml
N.D.
N.D.
+0.0
-0.2
-0.2
carbon source
Trisodium citrate (C)
N.D.
N.D.
+0.1
-0.0
-0.5
carbon source
D-Lactate (C)
N.D.
N.D.
-0.1
-0.3
+0.1
carbon source
L-Alanine (C)
N.D.
N.D.
-0.3
-0.1
+0.2
carbon source
L-Valine (C)
N.D.
N.D.
-0.1
-0.3
+0.2
carbon source
L-Phenylalanine (C)
N.D.
N.D.
-0.2
-0.2
+0.2
carbon source
Putrescine (C)
N.D.
N.D.
+0.3
-0.2
-0.0
carbon source
Glycerol (C)
N.D.
N.D.
-0.2
+0.2
+0.1
carbon source
L-Malic (C)
N.D.
N.D.
-0.2
+0.2
+0.2
carbon source
D-Alanine (C)
N.D.
N.D.
+0.1
-0.3
+0.3
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
-0.1
-0.1
+0.4
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
+0.2
-0.6
+0.6
nitrogen source
L-Asparagine (N)
N.D.
N.D.
+0.1
-0.0
+0.3
stress
Dimethyl Sulfoxide 7.5 vol%
N.D.
N.D.
+0.2
-0.1
+0.3
carbon source
D-Fructose (C)
N.D.
N.D.
+0.1
-0.1
+0.5
stress
Bacitracin 0.5 mg/ml
N.D.
N.D.
+0.1
+0.2
+0.2
carbon source
Glycerol (C)
N.D.
N.D.
+0.4
+0.1
-0.0
stress
Vancomycin 0.5 mg/ml
N.D.
N.D.
+0.1
+0.2
+0.3
carbon source
L-Lactate (C)
N.D.
N.D.
+0.1
+0.4
+0.1
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
-0.1
+0.5
+0.3
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