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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_1726 and PfGW456L13_1727 are separated by 169 nucleotides
PfGW456L13_1727 and PfGW456L13_1728 are separated by 64 nucleotides
PfGW456L13_1728 and PfGW456L13_1729 are separated by 147 nucleotides
PfGW456L13_1729 and PfGW456L13_1730 are separated by 66 nucleotides
PfGW456L13_1726 - FIG00953680: hypothetical protein, at 1,902,326 to 1,902,613
_1726
PfGW456L13_1727 - NAD(FAD)-utilizing enzyme possibly involved in translation, at 1,902,783 to 1,903,640
_1727
PfGW456L13_1728 - L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16), at 1,903,705 to 1,904,904
_1728
PfGW456L13_1729 - YaeQ protein, at 1,905,052 to 1,905,594
_1729
PfGW456L13_1730 - Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-), at 1,905,661 to 1,907,370
_1730
Group
Condition
PfGW456L13
_1726
PfGW456L13
_1727
PfGW456L13
_1728
PfGW456L13
_1729
PfGW456L13
_1730
carbon source
octanoate (C)
-1.5
-0.2
-0.3
-0.7
+0.4
carbon source
D-Gluconic Acid (C)
-0.3
-0.4
+0.0
-1.8
+0.3
carbon source
Putrescine (C)
-0.8
-0.3
-0.5
-0.1
-0.4
carbon source
L-Glutamine (C)
-0.4
+0.3
-0.3
-1.1
-0.4
carbon source
a-Ketoglutaric (C)
-0.8
+0.1
-0.3
-0.4
-0.4
stress
Cisplatin 0.0125 mg/ml
-0.5
+0.0
+0.1
-0.5
-0.5
stress
sodium fluoride 12.5 mM
-0.2
-0.1
-0.0
-0.8
+0.1
carbon source
D-Glucosamine Hydrochloride (C)
-0.6
+0.0
+0.1
+0.0
-0.4
carbon source
D-Galactose (C)
+0.5
-0.2
-0.3
-0.4
-0.4
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.2
+0.2
+0.2
-0.8
-0.1
nitrogen source
L-Serine (N)
-0.7
+0.3
-0.0
+0.1
+0.1
carbon source
Glycerol (C)
+0.4
+0.2
+0.2
-0.6
-0.1
stress
D-Cycloserine 0.125 mg/ml
-0.6
-0.2
+0.1
+0.5
+0.4
carbon source
L-Phenylalanine (C)
-0.5
+0.1
+0.1
+0.6
+0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.6
+0.2
+0.0
-0.5
+0.0
carbon source
D-Lactate (C)
-0.2
-0.3
+0.1
+0.6
+0.2
nitrogen source
D-Alanine (N)
-0.5
+0.1
+0.1
+0.6
+0.1
carbon source
D,L-Lactate (C)
-0.3
-0.0
+0.1
+0.7
+0.0
carbon source
succinate (C)
+0.6
+0.1
+0.2
+0.2
-0.3
carbon source
a-Ketoglutaric (C)
-0.1
-0.1
+0.5
+0.7
-0.0
carbon source
D-Mannose (C)
+0.4
+0.2
+0.2
+0.5
-0.2
nitrogen source
Uridine (N)
-0.1
+0.2
-0.0
+0.8
+0.1
nitrogen source
L-Glutamic (N)
+0.4
+0.1
-0.1
+0.6
-0.0
carbon source
L-Tryptophan (C)
+0.0
-0.0
+0.0
+1.0
+0.1
nitrogen source
Gly-Glu (N)
+0.2
+0.2
-0.2
+0.8
+0.2
nitrogen source
Gly-DL-Asp (N)
+0.4
+0.0
-0.0
+0.5
+0.4
carbon source
L-Malic (C)
+0.4
+0.3
+0.3
+0.4
-0.1
carbon source
D-Galactose (C)
+0.3
+0.1
+0.1
+1.1
-0.1
carbon source
L-Alanine (C)
+0.3
-0.0
+0.1
+1.0
+0.2
carbon source
D-Glucose (C)
+0.7
+0.0
+0.1
+0.8
+0.2
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PfGW456L13_1728
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