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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_1711 and PfGW456L13_1712 are separated by 239 nucleotides
PfGW456L13_1712 and PfGW456L13_1713 are separated by 388 nucleotides
PfGW456L13_1713 and PfGW456L13_1714 are separated by 12 nucleotides
PfGW456L13_1714 and PfGW456L13_1715 are separated by 258 nucleotides
PfGW456L13_1711 - Valyl-tRNA synthetase (EC 6.1.1.9), at 1,882,948 to 1,885,794
_1711
PfGW456L13_1712 - Permeases of the major facilitator superfamily, at 1,886,034 to 1,887,371
_1712
PfGW456L13_1713 - Magnesium and cobalt efflux protein CorC, at 1,887,760 to 1,888,992
_1713
PfGW456L13_1714 - Glutamate synthase [NADPH] small chain (EC 1.4.1.13), at 1,889,005 to 1,889,769
_1714
PfGW456L13_1715 - Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1), at 1,890,028 to 1,891,404
_1715
Group
Condition
PfGW456L13
_1711
PfGW456L13
_1712
PfGW456L13
_1713
PfGW456L13
_1714
PfGW456L13
_1715
carbon source
Trisodium citrate (C)
N.D.
-0.3
-0.7
-1.9
N.D.
carbon source
L-Glutamine (C)
N.D.
-0.4
-0.2
-2.1
N.D.
carbon source
D-Fructose (C)
N.D.
+0.2
-0.5
-2.0
N.D.
carbon source
L-Arabinose (C)
N.D.
+0.2
-0.0
-2.1
N.D.
stress
Lomefloxacin 0.0004 mM
N.D.
-0.1
-0.5
-0.6
N.D.
carbon source
D-Lactate (C)
N.D.
-0.0
-0.4
-0.7
N.D.
nitrogen source
D-Serine (N)
N.D.
-0.1
-0.1
-0.8
N.D.
lb
LB
N.D.
-0.0
-0.1
-0.8
N.D.
carbon source
D-Glucosamine Hydrochloride (C)
N.D.
-0.0
+0.4
-1.3
N.D.
nitrogen source
nitrate (N)
N.D.
+0.0
+0.3
-1.3
N.D.
carbon source
octanoate (C)
N.D.
+0.4
+0.2
-1.5
N.D.
carbon source
L-Valine (C)
N.D.
+0.1
-0.2
-0.7
N.D.
nitrogen source
L-Serine (N)
N.D.
-0.2
+0.3
-0.7
N.D.
nitrogen source
L-Valine (N)
N.D.
-0.1
+0.2
-0.8
N.D.
nitrogen source
L-Proline (N)
N.D.
+0.0
+0.5
-0.8
N.D.
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
N.D.
+0.2
-0.7
+0.3
N.D.
nitrogen source
L-Asparagine (N)
N.D.
-0.1
+0.6
-0.5
N.D.
carbon source
L-Tryptophan (C)
N.D.
+0.3
-1.1
+0.9
N.D.
carbon source
D-Glucose (C)
N.D.
+0.3
+0.9
-1.1
N.D.
carbon source
Glycerol (C)
N.D.
+0.0
-0.4
+0.6
N.D.
nitrogen source
L-Lysine (N)
N.D.
+0.0
+0.6
-0.3
N.D.
carbon source
D-Glucosamine Hydrochloride (C)
N.D.
+0.2
-0.4
+0.6
N.D.
stress
Aluminum chloride 2.5 mM
N.D.
+0.1
-0.3
+0.6
N.D.
carbon source
D,L-Lactate (C)
N.D.
-0.3
+0.6
+0.2
N.D.
nitrogen source
L-Alanine (N)
N.D.
-0.2
+0.4
+0.3
N.D.
nitrogen source
Glycine (N)
N.D.
-0.1
+0.8
+0.3
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
+0.1
+0.4
+0.7
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
+0.1
+0.7
+0.4
N.D.
stress
D-Cycloserine 0.125 mg/ml
N.D.
+0.2
+0.4
+0.6
N.D.
carbon source
D-Lactate (C)
N.D.
+0.0
+0.5
+1.2
N.D.
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