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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_1688 and PfGW456L13_1689 are separated by 235 nucleotides
PfGW456L13_1689 and PfGW456L13_1690 overlap by 4 nucleotides
PfGW456L13_1690 and PfGW456L13_1691 are separated by 3 nucleotides
PfGW456L13_1691 and PfGW456L13_1692 are separated by 305 nucleotides
PfGW456L13_1688 - Predicted ATPase related to phosphate starvation-inducible protein PhoH, at 1,861,175 to 1,862,569
_1688
PfGW456L13_1689 - Molybdenum cofactor biosynthesis protein MoaC, at 1,862,805 to 1,863,278
_1689
PfGW456L13_1690 - Molybdenum cofactor biosynthesis protein MoaD, at 1,863,275 to 1,863,517
_1690
PfGW456L13_1691 - Molybdenum cofactor biosynthesis protein MoaE, at 1,863,521 to 1,863,973
_1691
PfGW456L13_1692 - Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein, at 1,864,279 to 1,865,055
_1692
Group
Condition
PfGW456L13
_1688
PfGW456L13
_1689
PfGW456L13
_1690
PfGW456L13
_1691
PfGW456L13
_1692
nitrogen source
nitrate (N)
-0.3
-1.6
-2.6
-1.2
-0.1
carbon source
D-Fructose (C)
-0.2
+0.1
-2.6
-0.8
+0.0
carbon source
D-Gluconic Acid (C)
-0.5
-0.6
-0.2
-1.7
+0.2
carbon source
D-Lactate (C)
+0.2
-0.4
-2.6
+0.2
-0.0
carbon source
D-Gluconic Acid (C)
-0.3
+0.1
-0.9
-1.2
-0.3
carbon source
L-Glutamine (C)
+0.0
-0.0
-1.4
-1.0
-0.1
stress
Vancomycin 0.5 mg/ml
+0.0
-0.5
-1.0
-0.8
-0.1
nitrogen source
L-Phenylalanine (N)
-0.1
-0.3
-1.0
-0.9
-0.1
nitrogen source
L-Leucine (N)
-0.3
-0.3
-0.2
-1.3
-0.1
carbon source
L-Histidine (C)
-0.0
-0.4
-1.5
-0.2
-0.1
carbon source
D-Galactose (C)
-0.1
+0.3
-2.1
-0.4
+0.1
carbon source
L-Lactate (C)
+0.1
-1.0
-0.1
-1.0
-0.1
carbon source
L-Arabinose (C)
-0.1
+0.2
-1.3
-0.8
-0.0
carbon source
L-Tryptophan (C)
+0.0
-0.7
-0.5
-1.0
+0.2
nitrogen source
Uridine (N)
-0.3
-0.0
-0.8
-0.5
+0.1
carbon source
L-Histidine (C)
-0.1
-0.8
+0.4
-1.2
+0.1
nitrogen source
L-Tryptophan (N)
-0.0
-0.4
+0.7
-1.7
-0.1
carbon source
L-Tryptophan (C)
-0.0
+0.2
-1.1
-0.5
+0.1
stress
Vancomycin 0.25 mg/ml
+0.1
-0.5
-0.7
-0.4
+0.2
nitrogen source
Gly-Glu (N)
-0.6
+0.3
-1.2
+0.4
+0.2
nitrogen source
Ammonium chloride (N)
-0.0
+0.0
+0.9
-1.4
-0.1
carbon source
L-Malic (C)
+0.2
+0.0
+0.6
-1.2
+0.2
nitrogen source
D-Serine (N)
-0.3
+0.3
+0.5
-0.8
+0.2
stress
Lomefloxacin 0.0004 mM
+0.3
+0.1
-0.9
+0.2
+0.2
carbon source
D-Mannose (C)
-0.1
+0.2
+0.9
-0.9
-0.1
carbon source
Trisodium citrate (C)
-1.2
+0.4
+0.4
+0.3
+0.1
carbon source
L-Valine (C)
-0.6
+0.1
+0.6
+0.4
-0.1
stress
Aluminum chloride 5 mM
-0.0
-0.5
+0.2
+0.9
-0.2
carbon source
a-Ketoglutaric (C)
-0.1
+1.0
-0.2
-0.5
+0.2
carbon source
L-Malic (C)
-0.1
+0.2
+1.4
-0.5
+0.0
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